6HMY structure in UniLectin3D

Mol* PDB structure viewer

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Comments

Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) / CTB in complex with fucosyl-GM1

Heim J, Hodnik V, Heggelund J, Anderluh G, Krengel U. Crystal structures of cholera toxin in complex with fucosylated receptors point to importance of secondary binding site. Scientific reports 2019

Matching protein

P01556 in UniLectin

Available structures

1CHP : no ligand
1CHQ : no ligand
1CT1 : bGal13bGalNAc14(aNeuAc23)bGal1
1FGB : no ligand
1G8Z : Gal
1XTC : no ligand
2CHB : bGal13bGalNAc14(aNeuAc23)bGal1
3CHB : bGal13bGalNAc14(aNeuAc23)bGal1
3EFX : A Lewis Y analog
5ELC : (aFuc 12) bGal 14 (aFuc 13) Gl
5ELE : aGalNAc 13 (aFuc 12) bGal 14 (
5ELF : aGalNAc 13 (aFuc 12) bGal 14 (
5LZG : Inhibitor PC262
5LZJ : Inhibitor Laura237
6HJD : bGal 14 (aFuc 13) GlcNAc
6HMW : Fuc
6HMY : Fuc(a1-2)Gal(b1-3)GalNAc(b1-4)

Related proteins
> 50% identity

Ligand

Glycan composition

IUPAC condensed

GlycoCT

RES
1b:x-dglc-HEX-1:5
2b:b-dgal-HEX-1:5
3b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
4s:n-acetyl
5b:b-dgal-HEX-1:5
6s:n-acetyl
7b:b-dgal-HEX-1:5
8b:a-lgal-HEX-1:5|6:d
LIN
1:1o(4+1)2d
2:2o(3+2)3d
3:3d(5+1)4n
4:2o(4+1)5d
5:5d(2+1)6n
6:5o(3+1)7d
7:7o(2+1)8d

PubMed DOI Glycan Array CFG RCSB.ORG PDBeGlyTouCan (glycan information)SwissModel (ligand interactions)Glyconnect and SugarBind glycan superstructure(s)Uniprot

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