1VPS structure in UniLectin3D

Mol* PDB structure viewer

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Comments

murine polyomavirus VP1 with a disialylated hexasaccharide

Stehle, T., Harrison, S.C. High-resolution structure of a polyomavirus VP1-oligosaccharide complex: implications for assembly and receptor binding EMBO J. 1997

Matching protein

P49302 in UniLectin

Available structures

1SID : aNeuAc23bGal14Glc
1SIE : aNeuAc23bGal13(aNeuAc26)GlcNAc
1VPN : no ligand
1VPS : aNeuAc23bGal13(aNeuAc26)GlcNAc
5CPU : no ligand
5CPW : no ligand
5CPX : no ligand
5CPY : no ligand
5CPZ : no ligand
5CQ0 : no ligand

Related proteins
> 50% identity

Ligand

Glycan composition

IUPAC condensed

GlycoCT

RES
1b:x-dglc-HEX-1:5
2s:n-acetyl
3b:b-dgal-HEX-1:5
4b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
5s:n-acetyl
6b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
7s:n-acetyl
LIN
1:1d(2+1)2n
2:1o(3+1)3d
3:3o(3+2)4d
4:4d(5+1)5n
5:1o(6+2)6d
6:6d(5+1)7n

PubMed DOI RCSB.ORG PDBeGlyTouCan (glycan information)SwissModel (ligand interactions)Glyconnect and SugarBind glycan superstructure(s)Uniprot

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