Q15818 identified as Pentraxin in LectomeXplore
Q15818
|1 |101 |201 |301 |401 |501 |601 |701 |801 |901 |1,001 |1,101 |1,201 [232,418] Pentraxin_HMM[11:194] Pentraxin Pentraxin_HMM[11:194][232,418] Pentraxin_HMM[11:194] Pentraxin [245,391] Laminin_G_3_PF13385.9 PFAM Laminin_G_3_PF13385.9[245,391] Laminin_G_3_PF13385.9 PFAM
Sources:
  • Pentraxin
  • PFAM
Redundant proteins identified: KAI4052058.1 
Structural models
AlphaFold v2: AF-Q15818-F1Download
  Model Confidence:
  •    Very high (pLDDT > 90)
  •    Confident (90 > pLDDT > 70)
  •    Low (70 > pLDDT > 50)
  •    Very low (pLDDT < 50)

  AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Amino acid conservation
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1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374757677787980818283848586878889909192939495969798991001011021031041051061071081091101111121131141151161171181191201211221231241251261271281291301311321331341351361371381391401411421431441451461471481491501511521531541551561571581591601611621631641651661671681691701711721731741751761771781791801811821831841851861871880.00.10.20.30.40.50.60.70.80.91.0FPKESVTDYVSLKAPLEKPLKAFTLCLRAYSELSRAY-SLFSYATKRRDNELLVYKEKVIEYSLTVGRSKVLSKVIEKTVAPVHICVSWESASGIVEFWVDGKPLVK-KSLKKGYTVEAEAKIVLGQEQDSYGGKFERSQSLVGEIGDLYMWDSVLSPEEILSIY--LGTPLSANVLDWRALKYEVRG

1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374757677787980818283848586878889909192939495969798991001011021031041051061071081091101111121131141151161171181191201211221231241251261271281291301311321331341351361371381391401411421431441451461471481491501511521531541551561571581591601611621631641651661671681691701711721731741751761771781791801811821831841851861871880.00.10.20.30.40.50.60.70.80.91.0NL
Reference conserved motif. Graphics generated by Skylign
Gene viewer
View sequence for Pentraxin 232 : 418View gene sequenceView neighboring sequences
REFERENCE: FPKESVTDYVSLKAPLEKPLKAFTLCLRAYSELSRAY-SLFSYATKRRDNELLVYKEKVIEYSLTVGRSKVLSKVIEKTVAPVHICVSWESASGIVEFWVDGKPLVK-KSLKKGYTVEAEAKIVLGQEQDSYGGKFERSQSLVGEIGDLYMWDSVLSPEEILSIY--LGTPLSANVLDWRALKYEVRG
PREDICTED: FPLRTNYMYAKVKKSLPE-MYAFTVCMWLKSSATPGVGTPFSYAVPGQANELVLIEWGNNPMEILINDKVAKLPFVINDGKWHHICVTWTTRDGVWEAYQDGTQGGSGENLAPYHPIKPQGVLVLGQEQDTLGGGFDATQAFVGELAHFNIWDRKLTPGEVYNLATCSTKALSGNVIAWAESHIEIYG
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