Q12907 identified as ERGIC-VIP L-type in LectomeXplore

Q12907

NCBI protein

NP_006807

UniProt

Q12907

Length

Genus

Subspecies

Strain: assembly

Definition

Lectin class

Score

Chz/contig

NC_000005.10

Species

UniRef representative

Pfam

Cazy

Redundant proteins identified: A0A384NPY7 A8K7T4 BAF84788.1 BAD96329.1

Amino acid conservation

Best predicted lectin domain

Verified reference

Reference carbohydrate binding sites

Reference conserved motif. Graphics generated by Skylign

Gene viewer

REFERENCE: SSRRLEYKYSLKGPYLVQSDGTVPLWAFAGNAILSSDQIRLAPSLKSKRGSVWTKTKAALENWEVEVTFRVTGRGR--IGADGLAIWYTENQGLEGPVFGSADLFNGVGIFLDSFDNDEKKEN--PAIVVVGNNGQISYDHQKDGASQALASCQRDFRNKDYDVRAKITYYQKTLTVMINLEDKNDYEFCAKVENVVIPTQGYFGISAATGGLADDHDVLSLLLFQLI
PREDICTED: NSEHLKREHSLIKPYQGVGSSSMPLWDFQGSTMLTSQYVRLTPDERSKEGSIWNHQPCFLKDWEMHVHFKVHGTGKKNLHGDGIALWYTRDRLVPGPVFGSKDNFHGLAIFLDTYPNDETTERVFPYISVMVNNGSLSYDHSKDGRWTELAGCTADFRNRDHDTFLAVRYSRGRLTVMTDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISMKLFQLM

View sequence for ERGIC-VIP L-type 50 : 277 View sequence for Yeast Emp L-type 75 : 275View gene sequence View neighboring sequences

How to cite: François Bonnardel, Julien Mariethoz, Serge Pérez, Anne Imberty, Frédérique Lisacek, LectomeXplore, an update of UniLectin for the discovery of carbohydrate-binding proteins based on a new lectin classification, Nucleic Acids Research doi.org/10.1093/nar/gkaa1019