Q08830 identified as Ficolin-like in LectomeXplore

Q08830

NCBI protein

NP_004458

UniProt

Q08830

Length

Genus

Subspecies

Strain: assembly

Definition

Lectin class

Score

Chz/contig

NC_000008.11

Species

UniRef representative

Pfam

Cazy

Redundant proteins identified: KAI2549022.1 AAM88911.1 BAB70690.1 AAY68216.1

Amino acid conservation

Best predicted lectin domain

Verified reference

Reference carbohydrate binding sites

Reference conserved motif. Graphics generated by Skylign

Gene viewer

REFERENCE: RSCKDLLDEGSALSGLYTLLPDGRA--LQVFCDMDTDGGGWTVVQRRQDGSVDFYREWANYKQ-FGS---AEGEFWLGNDKIHALTAQGSSELRVDLVDFEGNNQFAKYKSFKVKDEEEKYKLDLGAFVGSAGDSLSL-HSNK----------QFSTKDKDRDASESNCAVKVKGAWWYKNCHESN--GLYLEGSHESYAD-GIDWSSAKGYSYSKKVSEMKVRP
PREDICTED: ADCSEIFNDGYKLSGFYKIKPLQSPAEFSVYCDM-SDGGGWTVIQRRSDGSENFNRGWKDYENGFGNFVQKHGEYWLGNKNLHFLTTQEDYTLKIDLADFEKNSRYAQYKNFKVGDEKNFYELNIGEYSGTAGDSLAGNFHPEVQWWASHQRMKFSTWDRDHDNYEGNCAEEDQSGWWFNRCHSANLNGVYYSGPYTAKTDNGIVWYTWHGWWYSLKSVVMKIRP

View sequence for Ficolin-like 81 : 304View gene sequence View neighboring sequences

How to cite: François Bonnardel, Julien Mariethoz, Serge Pérez, Anne Imberty, Frédérique Lisacek, LectomeXplore, an update of UniLectin for the discovery of carbohydrate-binding proteins based on a new lectin classification, Nucleic Acids Research doi.org/10.1093/nar/gkaa1019