O43827 identified as Ficolin-like in LectomeXplore

O43827

NCBI protein

NP_066969

UniProt

O43827

Length

Genus

Subspecies

Strain: assembly

Definition

Lectin class

Score

Chz/contig

NC_000001.11

Species

UniRef representative

Pfam

Cazy

Redundant proteins identified:

Amino acid conservation

Best predicted lectin domain

Verified reference

Reference carbohydrate binding sites

Reference conserved motif. Graphics generated by Skylign

Gene viewer

REFERENCE: SCKDLLDEGSALSGLYTLLPDGRA----LQVFCDMDTDGGGWTVVQRRQDGSVDFYREWANYKQ-FGSAEGEFWLGNDKIHALTAQGSSELRVDLVDFEGNNQFAKYKSFKVKDEEEKYKLDLGAFVGSAG-DSLSLHSNKQFSTKDKDRDASESNCAVKVKGAWWYKNCHESN--G-LYLEGSHESYADGIDWSSAKGYSYSKKVSEMKVRP
PREDICTED: DCSSLYQKNYRISGVYKLPPDDFLGSPELEVFCDMETSGGGWTIIQRRKSGLVSFYRDWKQYKQGFGSIRGDFWLGNEHIHRLSRQP-TRLRVEMEDWEGNLRYAEYSHFVLGNELNSYRLFLGNYTGNVGNDALQYHNNTAFSTKDKDNDNCLDKCAQLRKGGYWYNCCTDSNLNGVYYRLGEHNKHLDGITWYGWHGSTYSLKRVEMKIRP

View sequence for Ficolin-like 130 : 341View gene sequence View neighboring sequences

How to cite: François Bonnardel, Julien Mariethoz, Serge Pérez, Anne Imberty, Frédérique Lisacek, LectomeXplore, an update of UniLectin for the discovery of carbohydrate-binding proteins based on a new lectin classification, Nucleic Acids Research doi.org/10.1093/nar/gkaa1019