6FX2 structure in UniLectin3D

Mol* PDB structure viewer

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Comments

Complexed with fucosylated N-glycan

Cabanettes A, Perkams L, Spies C, Unverzagt C, Varrot A. Recognition of Complex Core-Fucosylated N-Glycans by a Mini Lectin. Angewandte Chemie (International ed. in English) 2018

Matching protein

A0A3B6UEU4 in UniLectin

Available structures

6EKE : no ligand
6FX1 : bGlcNAc12aMan16(bGlcNAc12aMan1
6FX2 : bGal14bGlcNAc12aMan16(bGlcNAc1
6FX3 : aNeuAc23bGal14bGlcNAc12aMan16(
6JK2 : no ligand
6JK3 : core-fucosylated chitobiose

Related proteins
> 50% identity

Ligand

Glycan composition

IUPAC condensed

GlycoCT

RES
1b:x-dglc-HEX-1:5
2s:n-acetyl
3b:b-dglc-HEX-1:5
4s:n-acetyl
5b:b-dman-HEX-1:5
6b:a-dman-HEX-1:5
7b:b-dglc-HEX-1:5
8s:n-acetyl
9b:a-dman-HEX-1:5
10b:b-dglc-HEX-1:5
11s:n-acetyl
12b:b-dgal-HEX-1:5
13b:a-lgal-HEX-1:5|6:d
LIN
1:1d(2+1)2n
2:1o(4+1)3d
3:3d(2+1)4n
4:3o(4+1)5d
5:5o(3+1)6d
6:6o(2+1)7d
7:7d(2+1)8n
8:5o(6+1)9d
9:9o(2+1)10d
10:10d(2+1)11n
11:10o(4+1)12d
12:1o(6+1)13d

PubMed DOI RCSB.ORG PDBeGlyTouCan (glycan information)SwissModel (ligand interactions)Glyconnect and SugarBind glycan superstructure(s)Uniprot

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