Mol* PDB structure viewer
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Class
Family
Resolution (Å)
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Comments
SP-D, Trimeric Neck+CRD
Wang H, Head J, Kosma P, Brade H, Müller-Loennies S, Sheikh S, McDonald B, Smith K, Cafarella T, Seaton B, Crouch E
Recognition of heptoses and the inner core of bacterial lipopolysaccharides by surfactant protein D Biochemistry 2008
Matching protein
Available structures
1B08 : no ligand
1PW9 : no ligand
1PWB : aGlc14Glc
2GGU : aGlc14aGlc14Glc
2GGX : p-nitrophenyl maltoside
2ORJ : ManNAc
2ORK : D-myo-inositol-1-phosphate
2OS9 : hexahydroxy-cyclohexane
2RIA : D-glycero-D-manno-heptose
2RIB : L-glycero-D-manno-heptose
2RIC : aLDmanHep13LLmanHep
2RID : 7-O-carbamoyl-L-glycero-D-mann
2RIE : 2-deoxy-L-glycero-D-manno-hept
3IKN : Gal
3IKP : no ligand
3IKQ : aMan12aMan
3IKR : aMan14Man
4E52 : aHep1-5anyhdroKdof
4M17 : no ligand
4M18 : aMan12aMan12Man
5OXR : aHep13aHep15Kdof
5OXS : aGlc13aHep13aHep15Kdof
1PW9 : no ligand
1PWB : aGlc14Glc
2GGU : aGlc14aGlc14Glc
2GGX : p-nitrophenyl maltoside
2ORJ : ManNAc
2ORK : D-myo-inositol-1-phosphate
2OS9 : hexahydroxy-cyclohexane
2RIA : D-glycero-D-manno-heptose
2RIB : L-glycero-D-manno-heptose
2RIC : aLDmanHep13LLmanHep
2RID : 7-O-carbamoyl-L-glycero-D-mann
2RIE : 2-deoxy-L-glycero-D-manno-hept
3IKN : Gal
3IKP : no ligand
3IKQ : aMan12aMan
3IKR : aMan14Man
4E52 : aHep1-5anyhdroKdof
4M17 : no ligand
4M18 : aMan12aMan12Man
5OXR : aHep13aHep15Kdof
5OXS : aGlc13aHep13aHep15Kdof
Related proteins
> 50% identity
> 50% identity
Ligand
Glycan composition
IUPAC condensed
GlycoCT
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