NCBI Summary
This gene encodes a member of the tenascin family of extracellular matrix glycoproteins. The encoded protein is restricted to the central nervous system. The protein may play a role in neurite outgrowth, neural cell adhesion and modulation of sodium channel function. It is a constituent of perineuronal nets. [provided by RefSeq, Aug 2013].
Protein
Protein (NP_003276)
Tenascin-R
Tenascin-R (TN-R) (Janusin) (Restrictin)
TNR
tenascin R
Undefined
Very low evidence
Ficolin-like
Undefined
a/b mixed with b-sheet / Fibrinogen C-ter like
Uncharacterised
NP_003276
7143
Q92752
ENSP00000356646.1
Q8BYI9
0.619
Undefined
PFAM, InterPro, CPX-1019
Protein sequence and protein families (fasta) (1358 amino acids) Download
MGADGETVVLKNMLIGINLILLGSMIKPSECQLEVTTERVQRQSVEEEGGIANYNTSSKEQPVVFNHVYNINVPLDNLCSSGLEASAEQEVSAEDETLAEYMGQTSDHESQVTFTHRINFPKKACPCASSAQVLQELLSRIEMLEREVSVLRDQCNANCCQESAATGQLDYIPHCSGHGNFSFESCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPTDCSSRGLCVDGECVCEEPYTGEDCRELRCPGDCSGKGRCANGTCLCEEGYVGEDCGQRQCLNACSGRGQCEEGLCVCEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQPTALGGLQLQQRVPGDWSGVTITELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQGLQFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQVPSDVTSFNQTGLKPGEEYIVNVVALKEQARSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWIPPRAKVDFILLKYGLVGGEGGRTTFRLQPPLSQYSVQALRPGSRYEVSVSAVRGTNESDSATTQFTTEIDAPKNLRVGSRTATSLDLEWDNSEAEVQEYKVVYSTLAGEQYHEVLVPRGIGPTTRATLTDLVPGTEYGVGISAVMNSQQSVPATMNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITFTPSSGIASEVTVPKDRTSYTLTDLEPGAEYIISVTAERGRQQSLESTVDAFTGFRPISHLHFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEEEMMEVSLDATKRHAVLMGLQPATEYIVNLVAVHGTVTSEPIVGSITTGIDPPKDITISNVTKDSVMVSWSPPVASFDYYRVSYRPTQVGRLDSSVVPNTVTEFTITRLNPATEYEISLNSVRGREESERICTLVHTAMDNPVDLIATNITPTEALLQWKAPVGEVENYVIVLTHFAVAGETILVDGVSEEFRLVDLLPSTHYTATMYATNGPLTSGTISTNFSTLLDPPANLTASEVTRQSALISWQPPRAEIENYVLTYKSTDGSRKELIVDAEDTWIRLEGLLENTDYTVLLQAAQDTTWSSITSTAFTTGGRVFPHPQDCAQHLMNGDTLSGVYPIFLNGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRVGFGNVEDEFWLGLDNIHRITSQGRYELRVDMRDGQEAAFASYDRFSVEDSRNLYKLRIGSYNGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPYNHRLMAGRKRQSLQF
Mol* PDB structure viewerUniLectin3D
Structural models
AlphaFold v2: AF-Q92752-F1Download
  Model Confidence:
  •    Very high (pLDDT > 90)
  •    Confident (90 > pLDDT > 70)
  •    Low (70 > pLDDT > 50)
  •    Very low (pLDDT < 50)

  AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Oligomerization and Known Interactions
Forms oligomers. Interacts with CNTN1, TNC, and FN1. Interacts with BCAN and ACAN in a calcium-dependent manner. Interacts with SCN2B, PTPRZ1, and CSPG3 (By similarity)
Annotation
Ligand
Glycan ligands from structural data
No crystal structures of complexes with glycan ligand.
Expression
Human Protein Atlas
GeneCards
Functionality temporarily unavailable.
ProteomicsDB
References
NCBI References (10 PubMed Identifiers)
  • A case-control genome-wide association study of ADHD discovers a novel association with the tenascin R (TNR) gene. [30563984]
  • A cross-species genetic analysis identifies candidate genes for mouse anxiety and human bipolar disorder. [26190982]
  • Tenascins and inflammation in disorders of the nervous system. [23269478]
  • Tenascin-R: role in the central nervous system. [22634605]
  • Homozygous deletion of Tenascin-R in a patient with intellectual disability. [22730557]
  • The human tenascin-R gene. [8940128]
  • Human tenascin-R. Complete primary structure, pre-mRNA alternative splicing and gene localization on chromosome 1q23-q24. [8626505]
  • Distinct effects of recombinant tenascin-R domains in neuronal cell functions and identification of the domain interacting with the neuronal recognition molecule F3/11. [9081628]
  • Evolution of the tenascin family--implications for function of the C-terminal fibrinogen-like domain. [7530148]
  • Tenascin-C, tenascin-R and tenascin-X: a family of talented proteins in search of functions. [7694605]
UniProt Main References (2 PubMed Identifiers)
  • The DNA sequence and biological annotation of human chromosome 1. [16710414]
  • Enrichment of glycopeptides for glycan structure and attachment site identification. [19838169]
All isoforms of this gene containing a lectin domain
NP_001315564.1, XP_011508251.1, NP_003276.3, XP_016857707.1, XP_016857708.1
RNA
RNA (Transcript ID: NM_003285.3)
NM_003285.3
tenascin R, transcript variant 1
All isoforms of TNR containing a lectin domain
ENST00000367674.7
535..4611 (or 175323357.. 175406714)
175315194.. 175743595
NCBI Matured mRNA sequence 12774 NTPDownload 
m7G-5')ppp(5'-ACGUCAGAGGCAGGAACCGACUGUGCUAAGGCUGUUGGCUCAACACCCAGAGGAGACGGGCAGACCCAGGGAGAGUGAGAGAAGGGGGUCCUCUCUGACCCAAGGAAUUACCACUAGUGGAGUGAAGCCACCUGACUUUUUGAUCUUAUUUUGGUUGCCUCCUCAUUCUCCUUCCACCCGUAGCCCUGACAGCUUGGGUUUCAUUUCUUUCGUGGAGCCUUGUCUCUUCCUCCCAGAAUAGGAGGAAGGGAAGAGAAGGGAAAGAGGAGGGCUCUCUAGGUGAGCGCAUCAGCUGGCUCCAGCCUGAGCAAGCAAGAAUUUUCUUCCCAGGAAGCUCCUCUCGCUCCCCGGCCGCCCACCCCCAGCCUGGGUGGCUGUAUCGUUUUAACUGCAUAGAGGGCAGGUCUCUUUUGGAAUUAGGAUUAAAGAAAGUGCAGUAAAGAGAAAGCAUCGAAGACACCAUCACAAAAGAUUCCCACAACUCCAUGCUGUGUGCUGCAGGCUGGUCCUGAACCCAGAUCUCUGGCUGAGAGGAUGGGGGCAGAUGGGGAAACAGUGGUUCUGAAGAACAUGCUCAUUGGCAUCAACCUGAUCCUUCUGGGCUCCAUGAUCAAGCCUUCAGAGUGUCAGCUGGAGGUCACCACAGAAAGGGUCCAGAGACAGUCAGUGGAGGAGGAGGGAGGCAUUGCCAACUACAACACAUCCAGCAAAGAGCAGCCUGUGGUCUUCAACCACGUGUACAACAUUAACGUGCCCUUGGACAACCUCUGCUCCUCAGGGCUAGAGGCCUCUGCUGAGCAGGAGGUGAGUGCAGAAGACGAGACUCUGGCAGAGUACAUGGGCCAGACCUCAGACCACGAGAGCCAGGUCACCUUUACACACAGGAUCAACUUCCCCAAAAAGGCCUGUCCAUGUGCCAGUUCAGCCCAGGUGCUGCAGGAGCUGCUGAGCCGGAUCGAGAUGCUGGAGAGGGAGGUGUCGGUGCUGCGAGACCAGUGCAACGCCAACUGCUGCCAAGAAAGUGCUGCCACAGGACAACUGGACUAUAUCCCUCACUGCAGUGGCCACGGCAACUUUAGCUUUGAGUCCUGUGGCUGCAUCUGCAACGAAGGCUGGUUUGGCAAGAAUUGCUCGGAGCCCUACUGCCCGCUGGGUUGCUCCAGCCGGGGGGUGUGUGUGGAUGGCCAGUGCAUCUGUGACAGCGAGUACAGCGGGGAUGACUGUUCCGAACUCCGGUGCCCAACAGACUGCAGCUCCCGGGGGCUCUGCGUGGACGGGGAGUGUGUCUGUGAAGAGCCCUACACUGGCGAGGACUGCAGGGAACUGAGGUGCCCUGGGGACUGUUCGGGGAAGGGGAGAUGUGCCAACGGUACCUGUUUAUGCGAGGAGGGCUACGUUGGUGAGGACUGCGGCCAGCGGCAGUGUCUGAAUGCCUGCAGUGGGCGAGGACAAUGUGAGGAGGGGCUCUGCGUCUGUGAAGAGGGCUACCAGGGCCCUGACUGCUCAGCAGUUGCCCCUCCAGAGGACUUGCGAGUGGCUGGUAUCAGCGACAGGUCCAUUGAGCUGGAAUGGGACGGGCCGAUGGCAGUGACGGAAUAUGUGAUCUCUUACCAGCCGACGGCCCUGGGGGGCCUCCAGCUCCAGCAGCGGGUGCCUGGAGAUUGGAGUGGUGUCACCAUCACGGAGCUGGAGCCAGGUCUCACCUACAACAUCAGCGUCUACGCUGUCAUUAGCAACAUCCUCAGCCUUCCCAUCACUGCCAAGGUGGCCACCCAUCUCUCCACUCCUCAAGGGCUACAAUUUAAGACGAUCACAGAGACCACCGUGGAGGUGCAGUGGGAGCCCUUCUCAUUUUCCUUCGAUGGGUGGGAAAUCAGCUUCAUUCCAAAGAACAAUGAAGGGGGAGUGAUUGCUCAGGUCCCCAGCGAUGUUACGUCCUUUAACCAGACAGGACUAAAGCCUGGGGAGGAAUACAUUGUCAAUGUGGUGGCUCUGAAAGAACAGGCCCGCAGCCCCCCUACCUCGGCCAGCGUCUCCACAGUCAUUGACGGCCCCACGCAGAUCCUGGUUCGCGAUGUCUCGGACACUGUGGCUUUUGUGGAGUGGAUUCCCCCUCGAGCCAAAGUCGAUUUCAUUCUUUUGAAAUAUGGCCUGGUGGGCGGGGAAGGUGGGAGGACCACCUUCCGGCUGCAGCCUCCCCUGAGCCAAUACUCAGUGCAGGCCCUGCGGCCUGGCUCCCGAUACGAGGUGUCAGUCAGUGCCGUCCGAGGGACCAACGAGAGCGAUUCUGCCACCACUCAGUUCACAACAGAGAUCGAUGCCCCCAAGAACUUGCGAGUUGGUUCUCGCACAGCAACCAGCCUUGACCUCGAGUGGGAUAACAGUGAAGCCGAAGUUCAGGAGUACAAGGUUGUGUACAGCACCCUGGCGGGUGAGCAAUAUCAUGAGGUACUGGUCCCCAGGGGCAUUGGUCCAACCACCAGGGCCACCCUGACAGAUCUGGUACCUGGCACUGAGUAUGGAGUUGGAAUAUCUGCCGUCAUGAACUCACAGCAAAGCGUGCCAGCCACCAUGAAUGCCAGGACUGAACUUGACAGUCCCCGAGACCUCAUGGUGACAGCCUCCUCGGAGACCUCCAUCUCCCUCAUCUGGACCAAGGCCAGUGGCCCCAUUGACCACUACCGAAUUACCUUUACCCCAUCCUCUGGGAUUGCCUCAGAAGUCACCGUACCCAAGGACAGGACCUCAUACACACUAACAGAUCUAGAGCCUGGGGCAGAGUACAUCAUUUCCGUCACUGCUGAGAGGGGUCGGCAGCAGAGCUUGGAGUCCACUGUGGAUGCUUUCACAGGCUUCCGUCCCAUCUCUCAUCUGCACUUUUCUCAUGUGACCUCCUCCAGUGUGAACAUCACUUGGAGUGAUCCAUCUCCCCCAGCAGACAGACUCAUUCUUAACUACAGCCCCAGGGAUGAGGAGGAAGAGAUGAUGGAGGUCUCCCUGGAUGCCACCAAGAGGCAUGCUGUCCUGAUGGGCCUGCAACCAGCCACAGAGUAUAUUGUGAACCUUGUGGCUGUCCAUGGCACAGUGACCUCUGAGCCCAUUGUGGGCUCCAUCACCACAGGAAUUGAUCCCCCAAAAGACAUCACAAUUAGCAAUGUGACCAAGGACUCAGUGAUGGUCUCCUGGAGCCCUCCUGUUGCAUCUUUCGAUUACUACCGAGUAUCAUAUCGACCCACCCAAGUGGGACGACUAGACAGCUCAGUGGUGCCCAACACUGUGACAGAAUUCACCAUCACCAGACUGAACCCAGCUACCGAAUACGAAAUCAGCCUCAACAGCGUGCGGGGCAGGGAGGAAAGCGAGCGCAUCUGUACUCUUGUGCACACAGCCAUGGACAACCCUGUGGAUCUGAUUGCUACCAAUAUCACUCCAACAGAAGCCCUGCUGCAGUGGAAGGCACCAGUGGGUGAGGUGGAGAACUACGUCAUUGUUCUUACACACUUUGCAGUCGCUGGAGAGACCAUCCUUGUUGACGGAGUCAGUGAGGAAUUUCGGCUUGUUGACCUGCUUCCUAGCACCCACUAUACUGCCACCAUGUAUGCCACCAAUGGACCUCUCACCAGUGGCACCAUCAGCACCAACUUUUCUACUCUCCUGGACCCUCCGGCAAACCUGACAGCCAGUGAAGUCACCAGACAAAGUGCCCUGAUCUCCUGGCAGCCUCCCAGGGCAGAGAUUGAAAAUUAUGUCUUGACCUACAAAUCCACCGAUGGAAGCCGCAAGGAGCUGAUUGUGGAUGCAGAAGACACCUGGAUUCGACUGGAGGGCCUGUUGGAGAACACAGACUACACGGUGCUCCUGCAGGCAGCACAGGACACCACGUGGAGCAGCAUCACCUCCACCGCUUUCACCACAGGAGGCCGGGUGUUCCCUCAUCCCCAAGACUGUGCCCAGCAUUUGAUGAAUGGAGACACUUUGAGUGGGGUUUACCCCAUCUUCCUCAAUGGGGAGCUGAGCCAGAAAUUACAAGUGUACUGUGAUAUGACCACCGACGGGGGCGGCUGGAUUGUAUUCCAGAGGCGGCAGAAUGGCCAAACUGAUUUUUUCCGGAAAUGGGCUGAUUACCGUGUUGGCUUCGGGAACGUGGAGGAUGAGUUCUGGCUGGGGCUGGACAAUAUACACAGGAUCACAUCCCAGGGCCGCUAUGAGCUGCGCGUGGACAUGCGGGAUGGCCAAGAGGCCGCCUUCGCCUCCUACGACAGGUUCUCUGUCGAGGACAGCAGAAACCUGUACAAACUCCGCAUAGGAAGCUACAACGGCACUGCGGGGGACUCCCUCAGCUAUCAUCAAGGACGCCCUUUCUCCACAGAGGAUAGAGACAAUGAUGUUGCAGUGACUAACUGUGCCAUGUCGUACAAGGGAGCAUGGUGGUAUAAGAACUGCCACCGGACCAACCUCAAUGGGAAGUACGGGGAGUCCAGGCACAGUCAGGGCAUCAACUGGUACCAUUGGAAAGGCCAUGAGUUCUCCAUCCCCUUUGUGGAAAUGAAGAUGCGCCCCUACAACCACCGUCUCAUGGCAGGGAGAAAACGGCAGUCCUUACAGUUCUGAGCAGUGGGCGGCUGCAAGCCAACCAAUAUUUUCUGUCAUUUGUUUGUAUUUUAUAAUAUGAAACAAGGGGGGAGGGUAAUAGCAAUGUGUUUUGCAACAUAUUAAGAGUAUGUGAAGGAAGCAGGGAUGUCGCAGGAAUCCGCUGGCUAACAUCUGCUCUUGGUUUCUGCUGCCCUGGAGCCUGACCCUCAGUCUCCAUUCUCCCUCCUACCCAGGCCUCCUCAACCUUCACCUCCUUUCCCACCAAGGAGGAGAAGUAGGAAGUUUUCUUAAAGGGCCAAUUCAAAGCCAAGUCGUGGGGUGCAGAUUGUUAUGGUGACAGGCACACACAUUUUUCUACCCUUCUUCUGAGAUGUCCUCUGCCUUCCAGGUAUUUGUGAUUUUGUCACAGCCUGACAUGGCCAGGUUCUCACACUGGCCCAGAGAAAAGAGCCUCAGCAAGAGAGUUUUGCCAACAAUUCCCCUUAAAAGGAAACAGAUCAACUACACCGCAUCCCAACAACCCAGGUUCUUUUCCUUCCUUCCUUCCUUCCUCCCUUCCUUCUUUCCUGCCUUCCCUCCUUCCCUCCUUUCUUUCUUGACAGUAUCUCACUCUUGCUCAGUCUGGAGUGCAGUGGUGCAAUCUCAGCUCACUACAGCCUCGACUUCCUGAGCUUAAGUGAUCCUCUCGUCUCAGCCUCUUGAGUAGCUGGGACUACAGGCAUGAGCCACCAUACCUGGCUGAUUUUUCUUUUAUUUUUUGUAGAGAUGGGGGUCUCACUGUGUUGUCCAGGCUGGUCACAAACUCCUGGCCUUGAACAAUCCUCCCACCUCAGCCUCCCAAAAUGCUGGGAUUACAGGCUACAGCCACUGCAUCCAGCCCCAAGUCCUUUAUAAUGGGCCAAAGAUUCUCAUCUUCUGACACUCUUAUUAUACCAGCCACAUGUCCUGUUACCUUUCAAGAACAGUGGCUCUUUUCUGGCCCUGAUGGAGUCUUUUGCCUAAUCCCAUCCUGUCUUAGACCCCAGAGCCUCAAAAGCCCAACCAGCAUUUUGGAAUCUAGUUCCCAAGGCAUUGCCUGCUCCUGGCCCUGGGUGGCACAGUGGCUAUGUGCCUGUGAGUCAUCAGCCACUGCCCCCACCCUCAGGUCAGACAGACAGUCACUUUCUGCAAAGGUAGGAGGGGGAGAUGGUUGUAGUUUUUAGCACUUUUGGGUCAAGCAUUGAGGAAAGGACUGAAGAAGUCAAAAUCAGGGCACUGCCAUAGAGAUUAUAGUUUCCAUGGGAAACACAGAUCUUCCCUAGCCCUGUUUUCUCCAUUUCUGGUCCUAUUUGUCACAGAUUCUUUUUUUCUGAAUUGCAAACCGAAGGCCUCAUAUCUAUCUUCACCCAAGCCCUCCUUAGUGUAGGUGGCUUAAUAAGAGUCAGGAGAAGAAGGUAUAUGCCCAGAGAGCUAUACCCCUGACUGAUAAUCCUGGAAAGAGGUUGAUUUUUUUUUUCUUUUUUGGUCCUAUGGGAAACAGGAAUGACCUUCUUAAUGAGGUGAGAUCAUGAGAAGCCUUUCCAUCUUCUUUUAUUAUUCUGCCUUGCAAAGGAAAAAUGACAAUAGCCAAAGGAAAUUACAUCCAGAAAUCCAAAGGUGAAUAGGUGAUAACUGUGGGCCUACUUCCCAUUUUAUGAGAUGCACUGUCUUCACUAGCACAAUUUGAUCUUAAGCCCAAGAGAGCUAGAUGCUCUAGAAGCCGUGACCUUUCAAUUUCUCCUCCAAAUCCAAUAUCAGCAACCAUCCCCGCAACAUCUGCCCAGAUCCAUGCCCAGUUCCCUGAGCUGUCUUCUCCCUUUCCUCUCCCAUUCCUCAAGGCCCAGCACCAUUUUCUGUAGUGCCUAUGUUUGUCUGACCAGAGCAGUGUGUACCUUUGCCAACCAGUUACUGGAUGAGCCUUAGUGUCGGCAAUUUUCUAAUGGAAAUAUCCUCACUCUUACCAAGCUUUGAGAACCAAGAUGAAAAGUCCCUUGGGCUGACCAUCAGGCCUCGGACCUCAUGGGGAUGCAGCCAGCCACCAUUGAAUGGAGGCGCUUCCCUUGCCGCAGGCUUCUAGGCUUUGUUCACUGCGGCAGUGUGGAUGUGACAGGCAUAACCCUGAAAAACCUAGGCACCACUUGCAUUUCUCAGUUAACCAUGGGCUUCAACAAACUGGGAGGAGGAAAAAACAGAAACAGAUCCUUUCAACAAGCAUGUAAAUUACAGAAGACUUACCUAGAGACGGGGCAACAAUGAAUAGUAGGAAGCACAUUGCAUGGGAAACUUGAGGGCCGAGGUACAGGCCAACAGCUGUCAUCUUAGCUACGACAUGACAUCGGCUGGGUUGUUUCACCUCUCUGGGCCAGUUUCUUCAUCUGUCAGAUGAGAGAUUAGACUAGAAUGAGUUCUAAUUUCCCUUUCAGUUUUGACGGUCAAUGAUGCUAAUCUGUGAUCUGAAAACCUAAGUAGAAAUUGGCAUGGUGGGACAGCACAAUUAGGUAAUGAAAAUUCACUAGACUCCCUGUUUAAUGAGGAAAGAAGGAAAGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGGGAGGGAGGGAGGGAAAGAAAAGAGAGAGAUUGAUUCAGGAGUCAUAAGUAAAACACACACACACACACACACACACACACGAAAAUACUGCAGAAAAGAUCAUGCCGAGUGAGAGGCUGAACUCUUUUUGUCCAUAAAAACAGAGACCAGGUACCUGGGUGGUGCCAGCACGCCCACUUCAUCAAGGAAGUUGAAAUGGAAAAAGAUUAUGUGUUGUCAAUUCAGGUGAAAGUCAAGAAACAUCAGUGGAAACAAAAAUCUUCCUUUUAUUGAAACCAUUCUACACUAUGGAACAUUUUUAUAAAUAGUACCAGCGGCAUUGCAUAGCUUUAUUUUGAAGCAAGAAAGAGACUUCAAAGAUCAGCUUAUUCAACCCUCUAUAAAAGGAUUUAUAGAUUCCUUUUAUUUAAUAGGGUGAUUUUCUCAUGAGUUUUCACCAUGUUUAAAAGACACUGUGCCCCACUCUCAUCCCAAGGUCUAUGGUCAACUUGACUCAAUGCUCAUAACUUUCCUCGCUGAUUCCUGCUUAUCCUGCUCCUCCAAGCACAACUGCAUUUCCCAAAGGUAGAUCCAGUAAGCAAUACUCUCAAAGCACCCACCCUAUGCACACCAGUUUCCCUCAAGGGACUCAAAAGGAAUCGAGGUAGACCCUUCUCAGAGGCUGUUUAACUACAGACACAUCAGGAUAUGUACUAAUACCCAAAACCAAAACCACCACCAAUGACUGCAAUAGAUUCACUGUCUAGACCCAAGGUCCAGGCAGUUUCCCUUUUUUGCAUUUCCCCAACAUAUAAAGAUAAUUUCCAACAUAUCAGAUGCACAUUCACCAGGGUUAUUUCUGGAAGGUGAAGGGGUCAGGUGUAGAAGAGGUGGCAAGAAUGACAAGUCUGUGGAAAACUGUUGGCCUUGAGACCACAGUGAACUGGUGGAAGGGGACUUGCUAAGUGUGGCCACAAGGUGGCAGUCACCUCCUGAAACCCCGUGUGAAACGUCAGCGGGGUUGAGAAAGGCCACGUCUCCAAGUUUCCAGGAGAGCCAAACCAGGACUCAGGAAAACCGGCCAGCUGAUUUGUAUGGGAGAUUGAUUUGUAAAAGAACAACAACAACAUAUGGCAGCAAGGAAAUGCAAAGCAAACAUCUACAAAUAUUUGAAUCCACCUGUCCCUCACCUACCAACUUCCCCCUCUACUACUCAUAAAGUGGUAGGACUCCUAAUGCCCCGCUUCCUUCCACCUGAGAACCAACCAGCACCCUGAUAUUUCAAAGCCAGACCUAAAGAACCAUGGUUGCCAAUAACCUCAAUGCCAAACCAAACAAUCCUAAUCACAUUUUUACUUUUCAAAUCCAGUCUCAGAGCAGAGCUGUAGAUUAAGGGACAAAAAGUCAUUGUGGAAUCUUUUCAAAUAGCUCUUGUAAAAGCAUCAGUUGGGAAAGAGUUUAUGAGUUCCUCUUUGUCCUCUCCUCUGGAGAAAAGACAGAACAUGCAAGAACACUAGAUACACCAAGCUAUGGGUGUUGAAAUAGACUAGCUGGUGACCUGGAUUUGCAAAUACCCUAGGGACAUGAAAACAUUUUUUCUUUUUCUUUUUCUUUUUUGUAACCUCCACCCAGAAUUUCAGGAAAGGUGGGGCCACAUGCCCAGGAUAUAUGGUAUUCUACUGCUUGCUUUCUUAUCACCAGAAUACUAGUCAAUCUGAUUUCUUAGUUCCAUGUCUUUUCUUCCAAGGAGGUAGGGCAUGGGGUUGGGGGACACUUUCCGCCUUCCUUGCAUCUCACUGUCCACUCUUAAAUUUUUAUUAAGAAACCUCUGAAAGAUUCAAAAUUCAGUUCAGUUUCAAUAAUCCCAAAGAAGUUGGGAUAAUUUGUUUUCACUUGCUUCAAACUUGCCACGGCUGCAGGAGGAGUCUCAGGACCUCAGAGGAAUGGGGCAGAUGUGUGAAGUCUGGGAGUCUGCCUCCCACCCAGAUGCCAGGAGCUGCAUACUCAGCUCUGCCUCACUUCCCUGAUGGUCUGCUUUCAUCCAGGUUACCAUGACAGAGAGGGUCUAUCCUCUAAAGAAAGCUGAGUUACAGGCUGGCCCCUGGGGUUGUUCCUGUAGCCUCUCUUUGACCACAUUCCUGAAGAUGUUUAGCUGAAUGCCUCCUCAAACCUUUGCUUCUUCCAUAACCCAAUCCUACACAUAUGUGAUAAAGCUUUCUUCAACAAUACUGGGUCAUUUGGACACUACCAGUCCAGAUGAGAACUCACAGACCAAAUGAAAACUUUCAAAAGCAAGCAGGGAAAGUAACUCCUAUAUGCUUUAAGAUGAUGUAUUGGUGUAGAUUCAGGUCCAAUUUGAAAAAAUGUCUCUGGUUCUUUCUAAUUGUAUCCACUCUGGAUUUGUUUAUGCCAGUUCUACAUUCAUCAAGCCUUGAGAAACAGGUGGAAAGAAGAAAAAUAUAAAAUUAAGAAGAAGCUGAUGGAUCAUUGGAGAUUCAAAACAAGCCUUCUACCGGUGGCACCACACUGAAAGGCAGAGACAAGGCAGGAGCGGCCAUGGGAGAGGAAGCAGCAUUGGCUUCUCACGUUCUGGCCUCCAGCCUCCCACCAGAGCUUCUGCCAUUCACCCACUUAACUUGAGGAGAAACUAAGGCACCAAGGCCUGUCACUGCACCGAAAACCAGAAGCAGAAGGACUUUCUUUCUUUGCUCAACCAGUUCUGCCUGGAUCUGACUUUUGCGUCACCAGUAGUCACAAGCCUGAUUUGUCAUCUCCAGCAUUCUGUUUAUUUUUUUAAGGUCAAUCUUUGCCUGAAACAUGACUUCAUUGCACCUGCAGCACUUCAUUGUCCAAAUGUCCUUGGCAAACCUCACAGUCUUUGGACAGUGUUGCAUUUUCUCCAAAGGGGAAAUCCUCUCUCCUUCCUCAAGCUUAAUAAGGCUCUUGCAGUGCAUCCAAAUAACACAGCUCUUGUUCCUCAGACACACUCAGCCCCCUCUGAUAACUUCAUAAAACAGCUCCUUAUUGUCUGGGCCAUGAAGCCAGGCUAAUGCUAAAGUUCCAGUUCAAAAACAUUUAACUCUAUUAUCCUUAUGAGGCCAGCUCUCCUGGGUACUGGCACUCACUCACUGGCACCAUGGAUUCAGGUCAGGUGGUGCAAACAUCUUCCCUGAGAAGCAAGCCAUACACCCAACAGGUCUAGAACACCUAGGUCACAAGAAAGGGUUUCAGUCCAGAUGCACUGUCAGUAAGUGAACACAAGGACAAGAAUGCAUGAACUGUUAUUUUCUUCCCAUCACUGGUUUAGCAGCCCCUAGGGAGACCCUGUGUUGCUCUUUAAUAUUCUGACAUGGAGCACUAAUAUGCUCAACACUGCCUCCAACAGGCAAAUGUUGGAAAUACACUUUCAGAGCUGGAUGGGACUCAAGAUCAUCUAAUAUAAUCCUCUCAUUUUAUUUCCUCUCAAGGAAACCAAGGGCAAGAAAGUUUAGGCAAUUUGCUCACAUUCACACAGGCAAUUAGUAACAGAGCUGAGUUCGGGUCUGGUAUAGGCUUUUUAAUUUGAUUCUCCACAAAUGAACACUAAGAUAAAUAGCAUUUAUUGCAUACCCACUAUUUACCAGAUACUGUGCAAAGGGCUUUACAUAUAUUACUUUACUAAAUCCUCACCAUAAACUUUAAGUCAGGUUUAACCAUUUUAUAGAAGAGGGAAGGGAGGGCCAGGAAGGUUAAGUAACAUGCUCAAAGUCACACAGCUACUAAAUAGAGCCAUAAUCUGAACCUUUGUCUAAUUUUGAAGCCCUUGAUUUUUCCACUUCAUGAGGCUGCUCUUUAUAUUUAUUUAGCUGAGUGACCACCAUCUUGGAUUUUACUAAUAUUCUUACAAGGGGGCUUUGAUGCCACUUCUUCUGACUUUUAAGAAAAGGAAAUUCUUGCAUUAUUUUUGCCAUGUACUCCAGGGGACCCUCAAUCUCAUCAUCAUGGGGAAUAAGAAACAUUCUGACAUCUCUUUCCUUUUCUUUCUUUUUAAAUUUGGUAGACGAGGGAGAGGGUCCCCAACAGAAUGAGAGGGGGAAGAUAAGAACCAGAACAUAAACCCAAUACCCCCCACCCCACUCUUUUGGGAACAUCCCAACAUUAGAAGAGUGGGAUAUCCAGUCAUUUUUUUCAAGCUGGAGCAGGCAGUGUAGCCAGGAUUGAGGAAGGAGAAGCCACAGAAUAAACAUGGCACAUGUUCUCAGAGCAUCAAUUUUACUCCAGAAUUUGGGAAGAAAGGAUUAUAUUAUUAGUGUAUUCAAACCAGUAUGGAUAGCACAAAUGCAGAUAUCCUAUAAAUUUUGAGGCUAACUCCAGCAGGUUGUAGACUGAUUUAGGCUACCUCCUUCCAGACUCCCAGGGGUACAAACACCUUCACAGUCCCCUGCGGGAGUACAUCAGUGGAAAUAUUUGGGGAAUGAGGCUAGAAGGCAGGAGAUACAUUCAGUUUACUUAUCCCCCUGGUUUCUUUUCCCCACUCCUUACCUGCCCCACAUCCCUAGUGGGUGGGAAGGCAUCAGAAGACAGUUGGCUACAAUAUCAGCUUUCUCUGCUACUUUGGGGAAUUUAGAAGGAAAUCAGUACUUGGCAACCUGGUAUUUUUAGCUGCCAGGCCAAAACUCCAGACAUAAACCCCUUCCCUUUAAUUGAAUGAUGUUUAUAUAUAAAGGAAUAGAUCUCCCCAAGAAAGAACCCCAGAACACUGGUUCCAUUCCAGUGUGGGGGCUGCUUGGGCAGCAGUGACACCUGUGCAUUAGAUGCAAUAGACACUUCAAUUCCUGCAAAAAUGUCGGCCAACUAAGUGCUCCUUUACCAACUGCGGAGGCCCAGACUCACACCAUGGUCCCACAGACUCAAGGUUUAGAAUCUAUGUGAGUCUAUUUUGGUUAACACACAGGCUCCUCCUUCCAAUCAUUCACACACACACACACACACACACACACACACACAUGCACACACACACAUGCAUGCACACAUACACAGGUGCACAUGCACAAACACACACAUCUAAUGAUUCCAACCUCGAAUACUCCCCAGGCCCAUGGGGAUGCCCAAGUACCCUAAGCAAAUCACUGUGACACUGAGGGGGUCAUUAACUGGGGCUCCGAGCAGCUGAAACCCACCCUGGUGGUCUCUAGAUUGUUGUUCUGAGAAAUCAUAAACACCAAAUCCUCCAAUCCCUUUGAAUUUGAGUUUGUCAUUUUAACCUUUAACAGCCUUUUCAGGUAAAAAUAACAAAGACCAAUUUAUUGACUUUGUAGCUACAAUGAGCUUGAAAAAGCGCUUACUUAAAAGAAAGACUGGAAGGAAGAAAAAAAAAAGAAAAUGGAGUACAUACUCCUCAGACGAUGCACACUUUAAUUAGCUAAAAUAAAAAUAAAAAUGUACAGAGGAAGGGAGAGGAAAAACCAACUUCUCUGAUCCUUUCAUGGCACUGUAGCUCAAAGACUGGAAUCUCUGCUUGUUAACCAUUGUUAACUAGUAUUUUUAGUCCUGGUUGCUUUUAGCCUCUGUAUAGUUCCUUUUUUAAACACAUUUUCUAUACGUUAAUAAAAGAUCCUGAAAGAAA-3'- Poly-A tail
  • Coding region
mRNA-related data
DNA
DNA (Gene ID: 7143)
TNR
tenascin R
NC_000001.11
1  175323357.. 175406714
175323357.. 175406714
strand -
CCDS1318.1
MGI:99516
ClinVar, dbVar
ENSG00000116147
uc009wwu.2
INSDC: X98085
11953
601995
OTTHUMG00000034876
ENA, DDBJ, Monarch
Gene-related data
NCBI CDS gene sequence (4077 bp)
5'-ATGGGGGCAGATGGGGAAACAGTGGTTCTGAAGAACATGCTCATTGGCATCAACCTGATCCTTCTGGGCTCCATGATCAAGCCTTCAGAGTGTCAGCTGGAGGTCACCACAGAAAGGGTCCAGAGACAGTCAGTGGAGGAGGAGGGAGGCATTGCCAACTACAACACATCCAGCAAAGAGCAGCCTGTGGTCTTCAACCACGTGTACAACATTAACGTGCCCTTGGACAACCTCTGCTCCTCAGGGCTAGAGGCCTCTGCTGAGCAGGAGGTGAGTGCAGAAGACGAGACTCTGGCAGAGTACATGGGCCAGACCTCAGACCACGAGAGCCAGGTCACCTTTACACACAGGATCAACTTCCCCAAAAAGGCCTGTCCATGTGCCAGTTCAGCCCAGGTGCTGCAGGAGCTGCTGAGCCGGATCGAGATGCTGGAGAGGGAGGTGTCGGTGCTGCGAGACCAGTGCAACGCCAACTGCTGCCAAGAAAGTGCTGCCACAGGACAACTGGACTATATCCCTCACTGCAGTGGCCACGGCAACTTTAGCTTTGAGTCCTGTGGCTGCATCTGCAACGAAGGCTGGTTTGGCAAGAATTGCTCGGAGCCCTACTGCCCGCTGGGTTGCTCCAGCCGGGGGGTGTGTGTGGATGGCCAGTGCATCTGTGACAGCGAGTACAGCGGGGATGACTGTTCCGAACTCCGGTGCCCAACAGACTGCAGCTCCCGGGGGCTCTGCGTGGACGGGGAGTGTGTCTGTGAAGAGCCCTACACTGGCGAGGACTGCAGGGAACTGAGGTGCCCTGGGGACTGTTCGGGGAAGGGGAGATGTGCCAACGGTACCTGTTTATGCGAGGAGGGCTACGTTGGTGAGGACTGCGGCCAGCGGCAGTGTCTGAATGCCTGCAGTGGGCGAGGACAATGTGAGGAGGGGCTCTGCGTCTGTGAAGAGGGCTACCAGGGCCCTGACTGCTCAGCAGTTGCCCCTCCAGAGGACTTGCGAGTGGCTGGTATCAGCGACAGGTCCATTGAGCTGGAATGGGACGGGCCGATGGCAGTGACGGAATATGTGATCTCTTACCAGCCGACGGCCCTGGGGGGCCTCCAGCTCCAGCAGCGGGTGCCTGGAGATTGGAGTGGTGTCACCATCACGGAGCTGGAGCCAGGTCTCACCTACAACATCAGCGTCTACGCTGTCATTAGCAACATCCTCAGCCTTCCCATCACTGCCAAGGTGGCCACCCATCTCTCCACTCCTCAAGGGCTACAATTTAAGACGATCACAGAGACCACCGTGGAGGTGCAGTGGGAGCCCTTCTCATTTTCCTTCGATGGGTGGGAAATCAGCTTCATTCCAAAGAACAATGAAGGGGGAGTGATTGCTCAGGTCCCCAGCGATGTTACGTCCTTTAACCAGACAGGACTAAAGCCTGGGGAGGAATACATTGTCAATGTGGTGGCTCTGAAAGAACAGGCCCGCAGCCCCCCTACCTCGGCCAGCGTCTCCACAGTCATTGACGGCCCCACGCAGATCCTGGTTCGCGATGTCTCGGACACTGTGGCTTTTGTGGAGTGGATTCCCCCTCGAGCCAAAGTCGATTTCATTCTTTTGAAATATGGCCTGGTGGGCGGGGAAGGTGGGAGGACCACCTTCCGGCTGCAGCCTCCCCTGAGCCAATACTCAGTGCAGGCCCTGCGGCCTGGCTCCCGATACGAGGTGTCAGTCAGTGCCGTCCGAGGGACCAACGAGAGCGATTCTGCCACCACTCAGTTCACAACAGAGATCGATGCCCCCAAGAACTTGCGAGTTGGTTCTCGCACAGCAACCAGCCTTGACCTCGAGTGGGATAACAGTGAAGCCGAAGTTCAGGAGTACAAGGTTGTGTACAGCACCCTGGCGGGTGAGCAATATCATGAGGTACTGGTCCCCAGGGGCATTGGTCCAACCACCAGGGCCACCCTGACAGATCTGGTACCTGGCACTGAGTATGGAGTTGGAATATCTGCCGTCATGAACTCACAGCAAAGCGTGCCAGCCACCATGAATGCCAGGACTGAACTTGACAGTCCCCGAGACCTCATGGTGACAGCCTCCTCGGAGACCTCCATCTCCCTCATCTGGACCAAGGCCAGTGGCCCCATTGACCACTACCGAATTACCTTTACCCCATCCTCTGGGATTGCCTCAGAAGTCACCGTACCCAAGGACAGGACCTCATACACACTAACAGATCTAGAGCCTGGGGCAGAGTACATCATTTCCGTCACTGCTGAGAGGGGTCGGCAGCAGAGCTTGGAGTCCACTGTGGATGCTTTCACAGGCTTCCGTCCCATCTCTCATCTGCACTTTTCTCATGTGACCTCCTCCAGTGTGAACATCACTTGGAGTGATCCATCTCCCCCAGCAGACAGACTCATTCTTAACTACAGCCCCAGGGATGAGGAGGAAGAGATGATGGAGGTCTCCCTGGATGCCACCAAGAGGCATGCTGTCCTGATGGGCCTGCAACCAGCCACAGAGTATATTGTGAACCTTGTGGCTGTCCATGGCACAGTGACCTCTGAGCCCATTGTGGGCTCCATCACCACAGGAATTGATCCCCCAAAAGACATCACAATTAGCAATGTGACCAAGGACTCAGTGATGGTCTCCTGGAGCCCTCCTGTTGCATCTTTCGATTACTACCGAGTATCATATCGACCCACCCAAGTGGGACGACTAGACAGCTCAGTGGTGCCCAACACTGTGACAGAATTCACCATCACCAGACTGAACCCAGCTACCGAATACGAAATCAGCCTCAACAGCGTGCGGGGCAGGGAGGAAAGCGAGCGCATCTGTACTCTTGTGCACACAGCCATGGACAACCCTGTGGATCTGATTGCTACCAATATCACTCCAACAGAAGCCCTGCTGCAGTGGAAGGCACCAGTGGGTGAGGTGGAGAACTACGTCATTGTTCTTACACACTTTGCAGTCGCTGGAGAGACCATCCTTGTTGACGGAGTCAGTGAGGAATTTCGGCTTGTTGACCTGCTTCCTAGCACCCACTATACTGCCACCATGTATGCCACCAATGGACCTCTCACCAGTGGCACCATCAGCACCAACTTTTCTACTCTCCTGGACCCTCCGGCAAACCTGACAGCCAGTGAAGTCACCAGACAAAGTGCCCTGATCTCCTGGCAGCCTCCCAGGGCAGAGATTGAAAATTATGTCTTGACCTACAAATCCACCGATGGAAGCCGCAAGGAGCTGATTGTGGATGCAGAAGACACCTGGATTCGACTGGAGGGCCTGTTGGAGAACACAGACTACACGGTGCTCCTGCAGGCAGCACAGGACACCACGTGGAGCAGCATCACCTCCACCGCTTTCACCACAGGAGGCCGGGTGTTCCCTCATCCCCAAGACTGTGCCCAGCATTTGATGAATGGAGACACTTTGAGTGGGGTTTACCCCATCTTCCTCAATGGGGAGCTGAGCCAGAAATTACAAGTGTACTGTGATATGACCACCGACGGGGGCGGCTGGATTGTATTCCAGAGGCGGCAGAATGGCCAAACTGATTTTTTCCGGAAATGGGCTGATTACCGTGTTGGCTTCGGGAACGTGGAGGATGAGTTCTGGCTGGGGCTGGACAATATACACAGGATCACATCCCAGGGCCGCTATGAGCTGCGCGTGGACATGCGGGATGGCCAAGAGGCCGCCTTCGCCTCCTACGACAGGTTCTCTGTCGAGGACAGCAGAAACCTGTACAAACTCCGCATAGGAAGCTACAACGGCACTGCGGGGGACTCCCTCAGCTATCATCAAGGACGCCCTTTCTCCACAGAGGATAGAGACAATGATGTTGCAGTGACTAACTGTGCCATGTCGTACAAGGGAGCATGGTGGTATAAGAACTGCCACCGGACCAACCTCAATGGGAAGTACGGGGAGTCCAGGCACAGTCAGGGCATCAACTGGTACCATTGGAAAGGCCATGAGTTCTCCATCCCCTTTGTGGAAATGAAGATGCGCCCCTACAACCACCGTCTCATGGCAGGGAGAAAACGGCAGTCCTTACAGTTCTGA-3'
NCBI CDS gene sequence with introns (location: 175323357.. 175406714) (83358 bp)Download
NCBI Gene Viewer (CDS + introns)
NCBI CDS gene sequence with introns, 5'UTR and 3'UTR (location: 175315194.. 175743595) (428402 bp)Download
NCBI Gene Viewer (CDS + introns + Untranslated regions)
NCBI gene sequence (location: [175315194.. 175743595 + 1000]) (429402 bp)Download
NCBI Gene Viewer (CDS + introns + Untranslated regions + 1000 dNTP to potentially reach the promotor)
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