NCBI Summary
This RefSeq record was created from transcript and genomic sequence data because no single transcript was available for the full length of the gene. The extent of this transcript is supported by transcript alignments.
Protein
Protein (NP_473451)
CBM13-ppGalNAc-T15
Polypeptide N-acetylgalactosaminyltransferase 15 (EC 2.4.1.41) (Polypeptide GalNAc transferase-like protein 2) (GalNAc-T-like protein 2) (pp-GaNTase-like protein 2) (Polypeptide N-acetylgalactosaminyltransferase-like protein 2) (Protein-UDP acetylgalactosaminyltransferase-like protein 2) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase-like protein 2)
GALNT15
polypeptide N-acetylgalactosaminyltransferase 15
Undefined
Curated
Ricin-like
R-Type Lectins
b-trefoil
GalNAc / Mucin-type glycopeptide
Undefined
Protein sequence and protein families (fasta) (639 amino acids) Download
MLLRKRYRHRPCRLQFLLLLLMLGCVLMMVAMLHPPHHTLHQTVTAQASKHSPEARYRLDFGESQDWVLEAEDEGEEYSPLEGLPPFISLREDQLLVAVALPQARRNQSQGRRGGSYRLIKQPRRQDKEAPKRDWGADEDGEVSEEEELTPFSLDPRGLQEALSARIPLQRALPEVRHPLCLQQHPQDSLPTASVILCFHDEAWSTLLRTVHSILDTVPRAFLKEIILVDDLSQQGQLKSALSEYVARLEGVKLLRSNKRLGAIRARMLGATRATGDVLVFMDAHCECHPGWLEPLLSRIAGDRSRVVSPVIDVIDWKTFQYYPSKDLQRGVLDWKLDFHWEPLPEHVRKALQSPISPIRSPVVPGEVVAMDRHYFQNTGAYDSLMSLRGGENLELSFKAWLCGGSVEILPCSRVGHIYQNQDSHSPLDQEATLRNRVRIAETWLGSFKETFYKHSPEAFSLSKAEKPDCMERLQLQRRLGCRTFHWFLANVYPELYPSEPRPSFSGKLHNTGLGLCADCQAEGDILGCPMVLAPCSDSRQQQYLQHTSRKEIHFGSPQHLCFAVRQEQVILQNCTEEGLAIHQQHWDFQENGMIVHILSGKCMEAVVQENNKDLYLRPCDGKARQQWRFDQINAVDER
No structure currently available in the PDB RCSB Databank.
Structural models
Model Confidence:
  •    Very high (pLDDT > 90)
  •    Confident (90 > pLDDT > 70)
  •    Low (70 > pLDDT > 50)
  •    Very low (pLDDT < 50)

  AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.


SWISS-MODEL structural models
Modeller structural model (Homology modelling pipeline), Error: [1.64, 2.16] ÅDownload
The location of the lectin domain structural model is: 504-631
We infer [1.64, 2.16] Å as the interval of error of this structural model.
Template: 1XHB chain: A, O08912, NP_001153876.1, sequence identity: 21.9%, coverage: 93.8%, location in sequence: 95-553, (95-553 in PDB).
Show the alignment used for the construction of the structural model, Download.
Show the plot of DOPE energy score, Download.
Ligand
Glycan ligands from structural data
No crystal structures of complexes with glycan ligand.
References
NCBI References (6 PubMed Identifiers)
  • A reference map of the human binary protein interactome. [32296183]
  • Investigation of genetic susceptibility factors for human longevity - a targeted nonsynonymous SNP study. [20800603]
  • Characterization of a novel human UDP-GalNAc transferase, pp-GalNAc-T15. [15147861]
  • The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. [12975309]
  • Identification and initial characterization of 5000 expressed sequenced tags (ESTs) each from adult human normal and osteoarthritic cartilage cDNA libraries. [11597177]
  • Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing. [11256614]
UniProt Main References (4 PubMed Identifiers)
  • Complete sequencing and characterization of 21,243 full-length human cDNAs. [14702039]
  • The full-ORF clone resource of the German cDNA Consortium. [17974005]
  • The DNA sequence, annotation and analysis of human chromosome 3. [16641997]
  • The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). [15489334]
All isoforms of this gene containing a lectin domain
NP_001305981.1, XP_016861171.1, XP_016861172.1, NP_473451.3
RNA
RNA (Transcript ID: NM_054110.5)
polypeptide N-acetylgalactosaminyltransferase 15, transcript variant 1
m7G-5')ppp(5'-ACAUCUGUUGAUCUGACCUGACUGGAAGCGUCCAAAGAGGGACGGCUGUCAGCCCUGCUUGACUGAGAACCCACCAGCUCAUCCCAGACACCUCAUAGCAACCUAUUUAUACAAAGGGGGAAAGAAACACCUGAGCAGAAUGGAAUCAUUAUUUUUUUCCCAAGGAGAAAACCGGGGUAAAGGGAGGGAAGCAAUUCAAUUUGAAGUCCCUGUGAAUGGGCUUUCAGAAGGCAAUUAAAGAAAUCCACUCAGAGAGGACUUGGGGUGAAACUUGGGUCCUGUGGUUUUCUGAUUGUAAGUGGAAGCAGGUCUUGCACACGCUGUUGGCAAAUGUCAGGACCAGGUUAAGUGACUGGCAGAAAAACUUCCAGGUGGAACAAGCAACCCAGGUUCUGCUGCAAGCUUGAAGGAGCCUGGAGCGGGAGAAAGCUAACUUGAACAUGACCUGUUGCAUUUGGCAAGUUCUAGCAACAUGCUCCUAAGGAAGCGAUACAGGCACAGACCAUGCAGACUCCAGUUCCUCCUGCUGCUCCUGAUGCUGGGAUGCGUCCUGAUGAUGGUGGCGAUGUUGCACCCUCCCCACCACACCCUGCACCAGACUGUCACAGCCCAAGCCAGCAAGCACAGCCCUGAAGCCAGGUACCGCCUGGACUUUGGGGAAUCCCAGGAUUGGGUACUGGAAGCUGAGGAUGAGGGUGAAGAGUACAGCCCUCUGGAGGGCCUGCCACCCUUUAUCUCACUGCGGGAGGAUCAGCUGCUGGUGGCCGUGGCCUUACCCCAGGCCAGAAGGAACCAGAGCCAGGGCAGGAGAGGUGGGAGCUACCGCCUCAUCAAGCAGCCAAGGAGGCAGGAUAAGGAAGCCCCAAAGAGGGACUGGGGGGCUGAUGAGGACGGGGAGGUGUCUGAAGAAGAGGAGUUGACCCCGUUCAGCCUGGACCCACGUGGCCUCCAGGAGGCACUCAGUGCCCGCAUCCCCCUCCAGAGGGCUCUGCCCGAGGUGCGGCACCCACUGUGUCUGCAGCAGCACCCUCAGGACAGCCUGCCCACAGCCAGCGUCAUCCUCUGUUUCCAUGAUGAGGCCUGGUCCACUCUCCUGCGGACUGUACACAGCAUCCUCGACACAGUGCCCAGGGCCUUCCUGAAGGAGAUCAUCCUCGUGGACGACCUCAGCCAGCAAGGACAACUCAAGUCUGCUCUCAGCGAAUAUGUGGCCAGGCUGGAGGGGGUGAAGUUACUCAGGAGCAACAAGAGGCUGGGUGCCAUCAGGGCCCGGAUGCUGGGGGCCACCAGAGCCACCGGGGAUGUGCUCGUCUUCAUGGAUGCCCACUGCGAGUGCCACCCAGGCUGGCUGGAGCCCCUCCUCAGCAGAAUAGCUGGUGACAGGAGCCGAGUGGUAUCUCCGGUGAUAGAUGUGAUUGACUGGAAGACUUUCCAGUAUUACCCCUCAAAGGACCUGCAGCGUGGGGUGUUGGACUGGAAGCUGGAUUUCCACUGGGAACCUUUGCCAGAGCAUGUGAGGAAGGCCCUCCAGUCCCCCAUAAGCCCCAUCAGGAGCCCUGUGGUGCCCGGAGAGGUGGUGGCCAUGGACAGACAUUACUUCCAAAACACUGGAGCGUAUGACUCUCUUAUGUCGCUGCGAGGUGGUGAAAACCUCGAACUGUCUUUCAAGGCCUGGCUCUGUGGUGGCUCUGUUGAAAUCCUUCCCUGCUCUCGGGUAGGACACAUCUACCAAAAUCAGGAUUCCCAUUCCCCCCUCGACCAGGAGGCCACCCUGAGGAACAGGGUUCGCAUUGCUGAGACCUGGCUGGGGUCAUUCAAAGAAACCUUCUACAAGCAUAGCCCAGAGGCCUUCUCCUUGAGCAAGGCUGAGAAGCCAGACUGCAUGGAACGCUUGCAGCUGCAAAGGAGACUGGGUUGUCGGACAUUCCACUGGUUUCUGGCUAAUGUCUACCCUGAGCUGUACCCAUCUGAACCCAGGCCCAGUUUCUCUGGAAAGCUCCACAACACUGGACUUGGGCUCUGUGCAGACUGCCAGGCAGAAGGGGACAUCCUGGGCUGUCCCAUGGUGUUGGCUCCUUGCAGUGACAGCCGGCAGCAACAGUACCUGCAGCACACCAGCAGGAAGGAGAUUCACUUUGGCAGCCCACAGCACCUGUGCUUUGCUGUCAGGCAGGAGCAGGUGAUUCUUCAGAACUGCACGGAGGAAGGCCUGGCCAUCCACCAGCAGCACUGGGACUUCCAGGAGAAUGGGAUGAUUGUCCACAUUCUUUCUGGGAAAUGCAUGGAAGCUGUGGUGCAAGAAAACAAUAAAGAUUUGUACCUGCGUCCGUGUGAUGGAAAAGCCCGCCAGCAGUGGCGUUUUGACCAGAUCAAUGCUGUGGAUGAACGAUGAAUGUCAAUGUCAGAAGGAAAAGAGAAUUUUGGCCAUCAAAAUCCAGCUCCAAGUGAACUUAAAGAGCUUAUAUAUUUCAUGAAGCUGAUCCUUUUGUGUGUGUGCUCCUGGUGUUAGGAGAGAAAAAAGCUCUAUGAAAGAAUAUAGGAAGUUUCUCCUUUUCACACCUUAUUUCAUUGACUGCUGGCUGCUUUAAAAAAAAAAAAAAAGGAUCCAUUGUACCGUUGUCUUCAUCACUGGGAAAUGAUUAUUACAUAGUACAGAAGAUUCUUUGUUUUUCUCCACUGAGCACUUAACAAUUGCUUUCUCUCUGGCCUGGACAUUCUCUGGCAGCACCUCCAGGAUACAUAAAUUCAAUGGAUCAAUUUAUUUGUCUUCAAAUGGCCUUAACUUGGAUUGUCUGUUUGGCCAACCAUGAAAAUUAAAGAGUGAAGCAGAUGUAAUGGCCUGACAUUCCAAAAACUCUGAAUUGGGUUUAUUAGCACAAAUGUUGUGUUCAUUUGUUGAGCCAUAUCUCAGAAGAAGGAAAGGGAGCUACAGAAAGGAGGUUUAGGAUUGCAGAGAAGAUGCAAGAGCACUUUGGCCCAAUUCUCCAGCUCAACCCAGCAGCUGAAAAGCUUCAAGAGAUCUAGGAAAAGACAUUUUCAUGUUAAUGAGAAUUUCCACCAUUGUAGAGAAUUUCCUUCCUACUGAGAAUCUACCUCUAUUCCCCCUGCCCUAGCUCUUCUCUAACUUGGUUAACCAUAACCAUAACCAGAUUCCCUUGCAAUCGAUUUCUCUUUAGUCGUUGGUGUUAGAAGUACCAGCACAAUUUGAGCAUUCCCAUUAACAAAGGUGUUCACAGUUGAGAAACUCUCCUGCCGGGCGCGGUGGCUCAUGCCUGUAAUUCCAGCACUUUGGGAGGCAGAGUUGGGAGGAUCACCUGAUGUCAGGGGUUUGAGACCAGCCUGGUCAACAUUGCAAAACCUUGUCUCUACUAAAAAUACAAAAAUUAGCUGGGCAUGGUGGCGCAUACCUGUAAUCCCAGCUACUUGGGAGGCUGAGGCAAGAGAAUCGCUUGAACCCAGGAGGCAGAGGUUGCAGUGAGCUGAGAUCAUGCCAUUGCACUCCAACCUGGGUGACAGAGUGAGACUCCAUCUCAAAAAAAAAAAAAAAGAGAGAAACUCUCCUGAUGCCCUGUUACAGGGUUUGCACUGACUGGAGCAGAAACAGCAACCUUUCUAAAAAAGCAAACCUUUUUCCUGGGAGGAAAAUGCCAGAGCCUGAGCCAAAAUUCUUAUGACAGGUAACAUUUGGGUGUUAAUGUCCAUGAGAGCUGACAGGGCCAUCUCUGAGCCCAUAUAACUGUCUGGAACCCCCAAAUGUGUCCACAGGUUGAAUGUCCAUGAGUGUGGGAAGAACACGGCUCAUCUGGAGCACAGCUGAGGCUAGUAAGAGCUAAAUGACUUUCCUUGCUAUGACUUGGCUUACCUGAAUUAGCUGUAAGAGUUGCCGAAUGGGAUGGGUUCUGCUAUUUAAUAAACAGCAUUCAUAUUCAUUUUUCCCCAGAUGGAGUUACCUACCUUUCCACAUGGUCAGCUUAGAAAUCUUCCCCUAAAGAUGCUAAUCUCCUUUGGGCUGUCUCAGAACACAGUAUCCUUCAAAUAAGAAAAACUGAGUGGGAAGUGCAGUGUUUCCAAACAAUACCUAUCAUAACUACGUAUUCAUUGUCUACCUGCUAAGUCAAGGGUUCACUGCAUUUCUCCUUCCUCAGAAUACACUCUGGACCUGUGCUGUCUAAUAUGGUAGCCACUAACAAAAUGUGGCCAUUUUGAUGGAAAUCCAUUAAAAUCAAAGAAAAUUUAAAACUCAAUUCCUCAAUUGGGCUGGCCACAUUUCAAAUGCUCACUACCCACCUGUGGCUAGGGUCUACUUCUACUGUAUUGGCGAGCAUGGAUAUAGAACAUUUCAUCACAGUUCUGUUGGACCAAUCUAGAUAGAUUCAUUAUCCCAUCUAGAGAAGAGACUUUAGUCACUGUCUUCUUGCUUCAGACCCAUCUAUAUUUAAAACAAAUUUCCCUAAAUCCUGAGACUGAGACGGAGCUACAAAUUCUCAGAUGGCGACCGUGUAAAUGGUAUUAGCGGCUGAAGAAAAAAAAUUUUUCAAGACCUCUGUUUUUUAACUGAACUUUAUCAUUGGCAUUGUGGGUCUUUGAAGUUGCUGGGAUAAAUUAAUAUAAUUAAAUAAAAGACUGAAUUUAAUUGCAUAAAUUGUAUUAGGUGGCAAUUAACAAAAGGACCCAGAUGGCUUAUUGCCUAAUUGGGUGAACAAAGCAAGAAUAUGGUGUUUCUUGCUUCCUUAACCAGCUCCAUGAUUUAUUACUUUAUUGCAGAAGUGGCUGUCAACUCAGUCCCUGGCUGGUAUUUACAGACCCUUAAUUUAAGUAAAACAGAUGCCUCCAUUUAGUUCUAGAAGGACCUUCUCCUUUAGUGUAACCAAGUGUUCAAAUUCCCUUCUUCUCUAUGAACUCAGCAUUCAUUUUAUCCAUAAUGAUCAAUUUAAAAGUAGAGAAACUUGUCAGUUGAGAGAUCUGAUUCCCAAGAGAUUGGUUUCACUUGUCUACCUGAAUUUUGUGAUUGGAUUUUGUUGUUCGUUUUUUAAGAUUGAAUUUUGUUACCACCCCCA-3'- Poly-A tail
  • Coding region
;
DNA
DNA (Gene ID: 117248)
polypeptide N-acetylgalactosaminyltransferase 15
strand +
GALNT7, pp-GalNAc-T15
NCBI CDS gene sequence (1920 bp)
5'-ATGCTCCTAAGGAAGCGATACAGGCACAGACCATGCAGACTCCAGTTCCTCCTGCTGCTCCTGATGCTGGGATGCGTCCTGATGATGGTGGCGATGTTGCACCCTCCCCACCACACCCTGCACCAGACTGTCACAGCCCAAGCCAGCAAGCACAGCCCTGAAGCCAGGTACCGCCTGGACTTTGGGGAATCCCAGGATTGGGTACTGGAAGCTGAGGATGAGGGTGAAGAGTACAGCCCTCTGGAGGGCCTGCCACCCTTTATCTCACTGCGGGAGGATCAGCTGCTGGTGGCCGTGGCCTTACCCCAGGCCAGAAGGAACCAGAGCCAGGGCAGGAGAGGTGGGAGCTACCGCCTCATCAAGCAGCCAAGGAGGCAGGATAAGGAAGCCCCAAAGAGGGACTGGGGGGCTGATGAGGACGGGGAGGTGTCTGAAGAAGAGGAGTTGACCCCGTTCAGCCTGGACCCACGTGGCCTCCAGGAGGCACTCAGTGCCCGCATCCCCCTCCAGAGGGCTCTGCCCGAGGTGCGGCACCCACTGTGTCTGCAGCAGCACCCTCAGGACAGCCTGCCCACAGCCAGCGTCATCCTCTGTTTCCATGATGAGGCCTGGTCCACTCTCCTGCGGACTGTACACAGCATCCTCGACACAGTGCCCAGGGCCTTCCTGAAGGAGATCATCCTCGTGGACGACCTCAGCCAGCAAGGACAACTCAAGTCTGCTCTCAGCGAATATGTGGCCAGGCTGGAGGGGGTGAAGTTACTCAGGAGCAACAAGAGGCTGGGTGCCATCAGGGCCCGGATGCTGGGGGCCACCAGAGCCACCGGGGATGTGCTCGTCTTCATGGATGCCCACTGCGAGTGCCACCCAGGCTGGCTGGAGCCCCTCCTCAGCAGAATAGCTGGTGACAGGAGCCGAGTGGTATCTCCGGTGATAGATGTGATTGACTGGAAGACTTTCCAGTATTACCCCTCAAAGGACCTGCAGCGTGGGGTGTTGGACTGGAAGCTGGATTTCCACTGGGAACCTTTGCCAGAGCATGTGAGGAAGGCCCTCCAGTCCCCCATAAGCCCCATCAGGAGCCCTGTGGTGCCCGGAGAGGTGGTGGCCATGGACAGACATTACTTCCAAAACACTGGAGCGTATGACTCTCTTATGTCGCTGCGAGGTGGTGAAAACCTCGAACTGTCTTTCAAGGCCTGGCTCTGTGGTGGCTCTGTTGAAATCCTTCCCTGCTCTCGGGTAGGACACATCTACCAAAATCAGGATTCCCATTCCCCCCTCGACCAGGAGGCCACCCTGAGGAACAGGGTTCGCATTGCTGAGACCTGGCTGGGGTCATTCAAAGAAACCTTCTACAAGCATAGCCCAGAGGCCTTCTCCTTGAGCAAGGCTGAGAAGCCAGACTGCATGGAACGCTTGCAGCTGCAAAGGAGACTGGGTTGTCGGACATTCCACTGGTTTCTGGCTAATGTCTACCCTGAGCTGTACCCATCTGAACCCAGGCCCAGTTTCTCTGGAAAGCTCCACAACACTGGACTTGGGCTCTGTGCAGACTGCCAGGCAGAAGGGGACATCCTGGGCTGTCCCATGGTGTTGGCTCCTTGCAGTGACAGCCGGCAGCAACAGTACCTGCAGCACACCAGCAGGAAGGAGATTCACTTTGGCAGCCCACAGCACCTGTGCTTTGCTGTCAGGCAGGAGCAGGTGATTCTTCAGAACTGCACGGAGGAAGGCCTGGCCATCCACCAGCAGCACTGGGACTTCCAGGAGAATGGGATGATTGTCCACATTCTTTCTGGGAAATGCATGGAAGCTGTGGTGCAAGAAAACAATAAAGATTTGTACCTGCGTCCGTGTGATGGAAAAGCCCGCCAGCAGTGGCGTTTTGACCAGATCAATGCTGTGGATGAACGATGA-3'
NCBI CDS gene sequence with introns (location: 16175152.. 16227500) (52349 bp)Download
NCBI CDS gene sequence with introns, 5'UTR and 3'UTR (location: 16174680.. 16230165) (55486 bp)Download
NCBI gene sequence (location: [16174680 - 1000].. 16230165) (56486 bp)Download
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