SMTL ID : 7v4s.1

Horcolin complex with methyl-alpha-mannose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

homo-dimer

Ligands

4 x MMA: methyl alpha-D-mannopyranoside(Non-covalent)

MMA.1: 6 residues within 4Å: Chain A: G.35, A.36, I.37, D.39, G.63, G.64 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.35, A:A.36, A:I.37, A:I.37, A:G.64 Water bridges: A:G.63 MMA.2: 7 residues within 4Å: Chain A: G.14, G.15, D.90, G.134, A.135, F.136, D.138 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.15, A:G.134, A:A.135, A:F.136, A:F.136 Water bridges: A:D.91 MMA.3: 6 residues within 4Å: Chain B: G.35, A.36, I.37, D.39, G.63, G.64 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:G.35, B:A.36, B:I.37, B:I.37, B:G.64 Water bridges: B:D.39 MMA.4: 7 residues within 4Å: Chain B: G.14, G.15, D.90, G.134, A.135, F.136, D.138 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:G.15, B:G.134, B:A.135, B:F.136, B:F.136 Water bridges: B:D.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Narayanan, V. et al., Structure and Carbohydrate Recognition by the Nonmitogenic Lectin Horcolin. Biochemistry (2022)

Release Date

2022-03-09

Peptides

Horcolin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Horcolin

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