SMTL ID : 7jud.1 (1 other biounit)

C-type carbohydrate-recognition domain 4 of the mannose receptor complexed with methyl-mannoside

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: E.99, N.101, E.107, N.121, D.122 Ligands: MMA.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.99, A:E.107, A:D.122, A:D.122 CA.2: 3 residues within 4Å: Chain A: S.45, N.47, E.51 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.45, A:E.51, A:E.51, H2O.1, H2O.2

1 x MMA: methyl alpha-D-mannopyranoside(Non-covalent)

MMA.3: 8 residues within 4Å: Chain A: E.99, N.101, Y.103, E.107, N.121, D.122, I.123 Ligands: CA.1 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.99, A:N.101, A:E.107, A:N.121, A:N.121

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Feinberg, H. et al., Structural analysis of carbohydrate binding by the macrophage mannose receptor CD206. J.Biol.Chem. (2021)

Release Date

2021-02-03

Peptides

Macrophage mannose receptor 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Macrophage mannose receptor 1

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