SMTL ID : 7bt9.1 (1 other biounit)

Mevo lectin complex with alpha-mannose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

homo-heptamer

Ligands

7 x MAN: alpha-D-mannopyranose

MAN.1: 8 residues within 4Å: Chain A: G.17, G.18, T.19, R.93, G.132, S.133, D.134, D.136 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.18, A:T.19, A:G.132, A:S.133, A:D.134, A:D.134 MAN.2: 7 residues within 4Å: Chain B: G.17, G.18, R.93, G.132, S.133, D.134, D.136 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.18, B:G.132, B:S.133, B:D.134, B:D.134 MAN.3: 7 residues within 4Å: Chain C: G.17, G.18, R.93, G.132, S.133, D.134, D.136 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:G.18, C:G.132, C:S.133, C:D.134, C:D.134 MAN.4: 8 residues within 4Å: Chain D: G.17, G.18, R.93, A.131, G.132, S.133, D.134, D.136 5 PLIP interactions: 5 interactions with chain D Hydrogen bonds: D:G.18, D:G.132, D:S.133, D:D.134, D:D.134 MAN.5: 8 residues within 4Å: Chain E: G.17, G.18, R.93, A.131, G.132, S.133, D.134, D.136 5 PLIP interactions: 5 interactions with chain E Hydrogen bonds: E:G.18, E:G.132, E:S.133, E:D.134, E:D.134 MAN.6: 7 residues within 4Å: Chain F: G.17, G.18, R.93, G.132, S.133, D.134, D.136 5 PLIP interactions: 5 interactions with chain F Hydrogen bonds: F:G.18, F:G.132, F:S.133, F:D.134, F:D.134 MAN.7: 7 residues within 4Å: Chain G: G.17, G.18, R.93, G.132, S.133, D.134, D.136 5 PLIP interactions: 5 interactions with chain G Hydrogen bonds: G:G.18, G:G.132, G:S.133, G:D.134, G:D.134

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Sivaji, N. et al., Structural and related studies on Mevo lectin from Methanococcus voltae A3. The first thorough characterisation of an archeal lectin and its interactions. Glycobiology (2020)

Release Date

2021-02-03

Peptides

lectin: ABCDEFG

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
G

C
A

D
D

E
E

F
F

G
C

lectin

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