- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x GOL: GLYCEROL(Non-functional Binders)
GOL.1: 8 residues within 4Å:- Chain A: D.17, I.18, Q.19, G.20, I.30, Y.32, H.35, N.39
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:G.20, A:A.21, A:H.35, A:N.39
GOL.2: 4 residues within 4Å:- Chain A: E.38, V.54, R.57
- Ligands: IPA.3
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:E.38, A:R.57, A:R.57
GOL.5: 3 residues within 4Å:- Chain A: D.45
- Chain B: E.4, F.43
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.45, A:D.45
GOL.7: 8 residues within 4Å:- Chain B: D.17, I.18, Q.19, G.20, I.30, Y.32, H.35, N.39
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:G.20, B:H.35, B:N.39
- 6 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
IPA.3: 4 residues within 4Å:- Chain A: E.38, F.55
- Chain B: Q.47
- Ligands: GOL.2
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:F.55
- Hydrogen bonds: A:E.38
IPA.4: 5 residues within 4Å:- Chain A: Q.47, I.48, G.49, W.82, Y.97
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:Y.97
IPA.6: 2 residues within 4Å:- Chain A: I.83, F.84
No protein-ligand interaction detected (PLIP)IPA.8: 4 residues within 4Å:- Chain B: Q.47, I.48, Q.81, W.82
No protein-ligand interaction detected (PLIP)IPA.9: 4 residues within 4Å:- Chain A: Q.47
- Chain B: E.38, F.55
- Ligands: IPA.10
1 PLIP interactions:1 interactions with chain B- Water bridges: B:Q.23
IPA.10: 4 residues within 4Å:- Chain B: E.38, V.54, R.57
- Ligands: IPA.9
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:V.54
- Hydrogen bonds: B:R.57, B:R.57
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
-
Khan, F. et al., Crystal structures of a beta-trefoil lectin from Entamoeba histolytica in monomeric and a novel disulphide bond-mediated dimeric forms. Glycobiology (2020)
- Release Date
- 2019-09-25
- Peptides
- lectin: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x GOL: GLYCEROL(Non-functional Binders)
- 6 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
-
Khan, F. et al., Crystal structures of a beta-trefoil lectin from Entamoeba histolytica in monomeric and a novel disulphide bond-mediated dimeric forms. Glycobiology (2020)
- Release Date
- 2019-09-25
- Peptides
- lectin: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B