SMTL ID : 5ymu.1 (3 other biounits)

Functional and structural characterization of P[19] rotavirus VP8* interaction with histo-blood group antigens

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: L.104, H.106, W.111, T.122, R.146, E.149 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:H.106, A:T.122, A:T.122, A:R.146, A:R.146

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Sun, X. et al., Glycan Binding Specificity and Mechanism of Human and Porcine P[6]/P[19] Rotavirus VP8*s. J. Virol. (2018)

Release Date

2018-05-23

Peptides

Outer capsid protein VP4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Outer capsid protein VP4

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