SMTL ID : 5yms.1 (7 other biounits)

Structural basis of glycan specificity and identification of a novel glycan binding cavity in human P[19] rotavirus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG.1: 6 residues within 4Å: Chain A: L.105, H.107, W.112, T.123, R.147, E.150 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.123, A:R.147

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Sun, X. et al., Glycan Binding Specificity and Mechanism of Human and Porcine P[6]/P[19] Rotavirus VP8*s. J. Virol. (2018)

Release Date

2018-05-02

Peptides

Outer capsid protein VP4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Outer capsid protein VP4

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