SMTL ID : 5f4m.1

Protruding domain of GII.17 norovirus Kawasaki323

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.27 Å

Oligo State

homo-dimer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: Q.57, N.86, L.87, N.88, L.102 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.88, A:N.88 Water bridges: A:L.87, A:N.88, A:L.102 EDO.2: 5 residues within 4Å: Chain B: Q.57, N.86, L.87, N.88, L.102 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:L.87, B:N.88, B:N.88 Water bridges: B:N.88

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Singh, B.K. et al., Structural Evolution of the Emerging 2014-2015 GII.17 Noroviruses. J.Virol. (2015)

Release Date

2016-01-13

Peptides

Capsid protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Capsid protein

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