- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.65 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CA: CALCIUM ION(Non-covalent)
- 2 x MN: MANGANESE (II) ION(Non-covalent)
MN.2: 4 residues within 4Å:- Chain A: E.8, D.10, D.19, H.24
5 PLIP interactions:3 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:E.8, A:D.10, A:H.24, H2O.1, H2O.1
MN.9: 5 residues within 4Å:- Chain B: E.8, D.10, D.19, H.24
- Ligands: CA.8
5 PLIP interactions:3 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:E.8, B:D.10, B:H.24, H2O.2, H2O.2
- 1 x CD: CADMIUM ION(Non-covalent)
- 1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- 3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.5: 5 residues within 4Å:- Chain A: S.113, L.126, P.178, V.179, H.180
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:P.178, A:H.180
EDO.10: 6 residues within 4Å:- Chain B: L.107, N.131, Q.132, D.151, G.152, N.153
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:L.107
EDO.11: 3 residues within 4Å:- Chain B: D.2, N.216, D.218
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:N.216
- 2 x 4WM: (4R)-4-{[(S)-tert-butoxy(hydroxy)methyl]amino}-5-[(1S)-cyclohex-2-en-1-ylselanyl]pentane-1,1-diol
4WM.6: 8 residues within 4Å:- Chain A: S.110, H.127, V.129, D.192, T.194
- Chain B: K.114, K.116, H.121
6 PLIP interactions:5 interactions with chain A, 1 interactions with chain B- Hydrophobic interactions: A:V.129, A:D.192, A:T.194
- Hydrogen bonds: A:S.110, B:K.114
- Salt bridges: A:H.127
4WM.7: 14 residues within 4Å:- Chain A: K.114, K.116, S.190, D.192
- Chain B: H.51, I.52, I.53, T.112, K.114, S.190, F.191, D.192, A.193, T.194
14 PLIP interactions:10 interactions with chain B, 4 interactions with chain A- Hydrophobic interactions: B:H.51, B:I.53, B:I.53, B:T.112, B:K.114, A:K.114, A:K.116
- Hydrogen bonds: B:T.112, B:D.192, B:D.192, B:D.192, A:S.190
- Salt bridges: B:H.127, A:K.114
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Nobrega, R.B. et al., Canavalia maritima lectin complexed with synthetic selenoamino acid. To Be Published
- Release Date
- 2015-11-18
- Peptides
- Concanavalin-A: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.65 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CA: CALCIUM ION(Non-covalent)
- 2 x MN: MANGANESE (II) ION(Non-covalent)
- 1 x CD: CADMIUM ION(Non-covalent)
- 1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- 3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x 4WM: (4R)-4-{[(S)-tert-butoxy(hydroxy)methyl]amino}-5-[(1S)-cyclohex-2-en-1-ylselanyl]pentane-1,1-diol
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Nobrega, R.B. et al., Canavalia maritima lectin complexed with synthetic selenoamino acid. To Be Published
- Release Date
- 2015-11-18
- Peptides
- Concanavalin-A: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B