- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.55 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x CA: CALCIUM ION(Non-covalent)
- 4 x MFU: methyl alpha-L-fucopyranoside(Non-covalent)
MFU.3: 12 residues within 4Å:- Chain A: N.21, S.22, A.23, E.95, D.96, S.97, D.99, D.101, D.104
- Chain B: G.114
- Ligands: CA.1, CA.2
7 PLIP interactions:6 interactions with chain A, 1 interactions with chain B- Hydrophobic interactions: A:A.23
- Hydrogen bonds: A:A.23, A:D.96, A:S.97, A:D.104, B:G.114
- Water bridges: A:T.98
MFU.6: 12 residues within 4Å:- Chain A: G.114
- Chain B: N.21, S.22, A.23, E.95, D.96, S.97, D.99, D.101, D.104
- Ligands: CA.4, CA.5
6 PLIP interactions:5 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:A.23, B:D.96, B:S.97, B:D.104, A:G.114
- Water bridges: B:D.99
MFU.9: 12 residues within 4Å:- Chain C: N.21, S.22, A.23, E.95, D.96, S.97, D.99, D.101, D.104
- Chain D: G.114
- Ligands: CA.7, CA.8
5 PLIP interactions:1 interactions with chain D, 4 interactions with chain C- Hydrogen bonds: D:G.114, C:A.23, C:D.96, C:S.97
- Water bridges: C:D.99
MFU.12: 12 residues within 4Å:- Chain C: G.114
- Chain D: N.21, S.22, A.23, E.95, D.96, S.97, D.99, D.101, D.104
- Ligands: CA.10, CA.11
5 PLIP interactions:4 interactions with chain D, 1 interactions with chain C- Hydrogen bonds: D:A.23, D:D.96, D:S.97, C:G.114
- Water bridges: D:T.98
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Sommer, R. et al., The virulence factor LecB varies in clinical isolates: consequences for ligand binding and drug discovery. Chem Sci (2016)
- Release Date
- 2016-05-25
- Peptides
- FUCOSE-BINDING LECTIN PA-IIL: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.55 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x CA: CALCIUM ION(Non-covalent)
- 4 x MFU: methyl alpha-L-fucopyranoside(Non-covalent)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Sommer, R. et al., The virulence factor LecB varies in clinical isolates: consequences for ligand binding and drug discovery. Chem Sci (2016)
- Release Date
- 2016-05-25
- Peptides
- FUCOSE-BINDING LECTIN PA-IIL: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D