SMTL ID : 4yfz.1

Structural basis of glycan recognition in neonate-specific rotaviruses

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x BGC- GAL- NAG- GAL: beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose(Non-covalent)

BGC-GAL-NAG-GAL.1: 9 residues within 4Å: Chain A: N.94, Y.95, I.97, W.117, G.118, S.119, Y.122, D.124, R.126 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.94, A:R.126, A:Y.122, A:Y.122, A:Y.95 Water bridges: A:R.93, A:R.93, A:S.119, A:S.119

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Hu, L. et al., Structural basis of glycan specificity in neonate-specific bovine-human reassortant rotavirus. Nat Commun (2015)

Release Date

2015-09-30

Peptides

Outer capsid protein VP4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Outer capsid protein VP4

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