SMTL ID : 4rpb.1 (2 other biounits)

Crystal Structure of P Domain of Snow Mountain Norovirus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.61 Å

Oligo State

monomer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: Q.55, N.85, L.86, N.87, L.101 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:L.86, A:N.87, A:N.87 Water bridges: A:N.87 EDO.2: 6 residues within 4Å: Chain A: L.50, Q.51, G.52, T.54, I.97, L.101 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.54 EDO.3: 4 residues within 4Å: Chain A: P.8, L.10, E.236, H.240 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.240

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Singh, B.K. et al., Structural Constraints on Human Norovirus Binding to Histo-Blood Group Antigens. mSphere

Release Date

2016-06-22

Peptides

Capsid protein VP1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Capsid protein VP1

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