- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x CA: CALCIUM ION(Non-covalent)
- 4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.2: 1 residues within 4Å:- Chain A: N.105
No protein-ligand interaction detected (PLIP)NAG.7: 1 residues within 4Å:- Chain B: N.105
No protein-ligand interaction detected (PLIP)NAG.12: 1 residues within 4Å:- Chain C: N.105
No protein-ligand interaction detected (PLIP)NAG.17: 1 residues within 4Å:- Chain D: N.105
No protein-ligand interaction detected (PLIP)- 4 x ACY: ACETIC ACID(Non-functional Binders)
ACY.3: 5 residues within 4Å:- Chain A: C.179, H.180, Y.196, A.197, W.208
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:A.197, A:W.208
- Hydrogen bonds: A:C.179, A:H.180
- Salt bridges: A:H.180
ACY.8: 5 residues within 4Å:- Chain B: C.179, H.180, Y.196, A.197, W.208
5 PLIP interactions:5 interactions with chain B- Hydrophobic interactions: B:A.197, B:W.208
- Hydrogen bonds: B:C.179, B:H.180
- Salt bridges: B:H.180
ACY.13: 5 residues within 4Å:- Chain C: C.179, H.180, Y.196, A.197, W.208
5 PLIP interactions:5 interactions with chain C- Hydrophobic interactions: C:A.197, C:W.208
- Hydrogen bonds: C:C.179, C:H.180
- Salt bridges: C:H.180
ACY.18: 5 residues within 4Å:- Chain D: C.179, H.180, Y.196, A.197, W.208
5 PLIP interactions:5 interactions with chain D- Hydrophobic interactions: D:A.197, D:W.208
- Hydrogen bonds: D:C.179, D:H.180
- Salt bridges: D:H.180
- 8 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 4 residues within 4Å:- Chain A: R.62, G.63, A.66, K.155
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:G.63
- Water bridges: A:N.59, A:R.62, A:R.62
- Salt bridges: A:R.62, A:K.155
SO4.5: 6 residues within 4Å:- Chain A: K.146, H.147, R.177, N.178, C.179, H.180
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.178, A:N.178, A:C.179
SO4.9: 4 residues within 4Å:- Chain B: R.62, G.63, A.66, K.155
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:G.63
- Water bridges: B:N.59, B:R.62, B:R.62
- Salt bridges: B:R.62, B:K.155
SO4.10: 6 residues within 4Å:- Chain B: K.146, H.147, R.177, N.178, C.179, H.180
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:N.178, B:N.178, B:C.179
SO4.14: 4 residues within 4Å:- Chain C: R.62, G.63, A.66, K.155
6 PLIP interactions:6 interactions with chain C- Hydrogen bonds: C:G.63
- Water bridges: C:N.59, C:R.62, C:R.62
- Salt bridges: C:R.62, C:K.155
SO4.15: 6 residues within 4Å:- Chain C: K.146, H.147, R.177, N.178, C.179, H.180
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:N.178, C:N.178, C:C.179
SO4.19: 4 residues within 4Å:- Chain D: R.62, G.63, A.66, K.155
6 PLIP interactions:6 interactions with chain D- Hydrogen bonds: D:G.63
- Water bridges: D:N.59, D:R.62, D:R.62
- Salt bridges: D:R.62, D:K.155
SO4.20: 6 residues within 4Å:- Chain D: K.146, H.147, R.177, N.178, C.179, H.180
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:N.178, D:N.178, D:C.179
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Shrive, A.K. et al., Crystal Structure of the Tetrameric Fibrinogen-like Recognition Domain of Fibrinogen C Domain Containing 1 (FIBCD1) Protein. J.Biol.Chem. (2014)
- Release Date
- 2013-12-11
- Peptides
- Fibrinogen C domain-containing protein 1: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x CA: CALCIUM ION(Non-covalent)
- 4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 4 x ACY: ACETIC ACID(Non-functional Binders)
- 8 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Shrive, A.K. et al., Crystal Structure of the Tetrameric Fibrinogen-like Recognition Domain of Fibrinogen C Domain Containing 1 (FIBCD1) Protein. J.Biol.Chem. (2014)
- Release Date
- 2013-12-11
- Peptides
- Fibrinogen C domain-containing protein 1: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A