SMTL ID : 4led.1 (1 other biounit)

The Crystal Structure of Pyocin L1 bound to D-rhamnose at 2.37 Angstroms

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.37 Å

Oligo State

monomer

Ligands

3 x XXR: alpha-D-rhamnopyranose(Non-covalent)

XXR.1: 9 residues within 4Å: Chain A: Q.148, D.150, N.152, Y.156, V.163, A.166, Y.168, M.170 Ligands: XXR.3 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.163, A:A.166 Hydrogen bonds: A:Q.148, A:Q.148, A:N.152, A:Y.156, A:Y.156 XXR.2: 7 residues within 4Å: Chain A: Q.178, D.180, N.182, V.184, Y.186, H.194, A.198 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.178, A:Q.178, A:N.182, A:Y.186, A:Y.186 XXR.3: 4 residues within 4Å: Chain A: Q.148, G.149, D.150 Ligands: XXR.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.150, A:D.150

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

McCaughey, L.C. et al., Lectin-Like Bacteriocins from Pseudomonas spp. Utilise D-Rhamnose Containing Lipopolysaccharide as a Cellular Receptor. Plos Pathog. (2014)

Release Date

2014-02-19

Peptides

Pyocin L1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Pyocin L1

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