SMTL ID : 4h14.1

Crystal Structure of Bovine Coronavirus Spike Protein Lectin Domain

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain A: D.4, V.118, N.119, T.149, D.173 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 5 residues within 4Å: Chain A: H.129, L.140, E.142, R.183, N.184 No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 2 residues within 4Å: Chain A: N.45, Q.262 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.45

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 4 residues within 4Å: Chain A: K.67, G.68, T.69, A.241 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.69, A:T.69 Salt bridges: A:K.67

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Peng, G. et al., Crystal structure of bovine coronavirus spike protein lectin domain. J.Biol.Chem. (2012)

Release Date

2012-10-31

Peptides

Spike glycoprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Spike glycoprotein