SMTL ID : 4cw8.1

Structure of the carboxy-terminal domain of the turkey type 3 siadenovirus fibre, virulent form

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-trimer

Ligands

6 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 2 residues within 4Å: Chain A: K.157, N.158 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.158, A:N.158 Salt bridges: A:K.157 PO4.2: 5 residues within 4Å: Chain A: N.98, K.99, S.100, E.102, K.178 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.98, A:S.100, A:E.102, A:E.102 Salt bridges: A:K.178 PO4.3: 2 residues within 4Å: Chain B: K.157, N.158 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:N.158, B:N.158 Salt bridges: B:K.157 PO4.4: 5 residues within 4Å: Chain B: N.98, K.99, S.100, E.102, K.178 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:N.98, B:S.100, B:E.102 Salt bridges: B:K.178 PO4.5: 2 residues within 4Å: Chain C: K.157, N.158 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:N.158, C:N.158 Salt bridges: C:K.157 PO4.6: 5 residues within 4Å: Chain C: N.98, K.99, S.100, E.102, K.178 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:N.98, C:S.100, C:E.102, C:E.102 Salt bridges: C:K.178

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Singh, A.K. et al., Structure and Sialyllactose Binding of the Carboxy-Terminal Head Domain of the Fibre from a Siadenovirus, Turkey Adenovirus 3. PLoS ONE (2015)

Release Date

2015-04-08

Peptides

FIBER KNOB DOMAIN: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

FIBER KNOB DOMAIN