SMTL ID : 4csd.1 (1 other biounit)

Structure of Monomeric Ralstonia solanacearum lectin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

6 x MFU: methyl alpha-L-fucopyranoside(Non-covalent)

MFU.1: 9 residues within 4Å: Chain A: R.109, E.120, Y.129, G.131, A.132, F.133, I.153, W.168, W.173 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.153 Hydrogen bonds: A:E.120, A:A.132, A:F.133 Water bridges: A:R.109 Salt bridges: A:R.109 MFU.2: 11 residues within 4Å: Chain A: W.145, R.154, E.165, C.167, G.176, A.177, Y.178, P.197, I.199, W.214, W.219 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:W.145, A:I.199 Hydrogen bonds: A:R.154, A:E.165, A:A.177, A:Y.178 Salt bridges: A:R.154 MFU.3: 10 residues within 4Å: Chain A: R.200, E.211, C.213, Y.220, G.222, A.223, F.224, I.244, W.259, W.264 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.244 Hydrogen bonds: A:E.211, A:Y.220, A:A.223, A:F.224 Water bridges: A:T.221, A:G.222 Salt bridges: A:R.200 MFU.4: 10 residues within 4Å: Chain A: P.15, I.17, W.32, W.37, W.236, R.245, E.256, G.267, A.268, Y.269 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.17, A:W.236 Hydrogen bonds: A:E.256, A:A.268, A:Y.269 Water bridges: A:K.266 Salt bridges: A:R.245 MFU.5: 9 residues within 4Å: Chain A: R.18, E.29, Y.38, G.40, A.41, F.42, I.62, W.77, W.82 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.62 Hydrogen bonds: A:E.29, A:A.41, A:F.42 Water bridges: A:T.39 Salt bridges: A:R.18 MFU.6: 10 residues within 4Å: Chain A: W.54, R.63, E.74, G.85, A.86, Y.87, P.106, I.108, W.123, W.128 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:W.54, A:I.108 Hydrogen bonds: A:E.74, A:A.86, A:Y.87 Water bridges: A:K.84, A:G.85 Salt bridges: A:R.63

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.7: 7 residues within 4Å: Chain A: A.8, T.9, V.51, T.52, A.99, T.100, S.101 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:T.9, A:V.51, A:T.52, A:T.100, A:S.101, A:S.101 Water bridges: A:S.10

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Arnaud, J. et al., Membrane Deformation by Neolectins with Engineered Glycolipid Binding Sites. Angew.Chem.Int.Ed.Engl. (2014)

Release Date

2014-10-08

Peptides

FUCOSE-BINDING LECTIN PROTEIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

FUCOSE-BINDING LECTIN PROTEIN

Related Entries With Identical Sequence