- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.55 Å
- Oligo State
- hetero-3-3-mer
- Ligands
- 3 x NAG- GAL- SIA: N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-functional Binders)
- 3 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-functional Binders)(Non-covalent)
NAG-NAG.2: 6 residues within 4Å:- Chain A: R.291
- Chain B: E.69, E.72, K.75, N.79, N.82
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:E.69
NAG-NAG.22: 6 residues within 4Å:- Chain C: R.291
- Chain D: E.69, E.72, K.75, N.79, N.82
1 PLIP interactions:1 interactions with chain D- Hydrophobic interactions: D:E.69
NAG-NAG.42: 6 residues within 4Å:- Chain E: R.291
- Chain F: E.69, E.72, K.75, N.79, N.82
1 PLIP interactions:1 interactions with chain F- Hydrophobic interactions: F:E.69
- 9 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)(Non-functional Binders)
NAG.3: 3 residues within 4Å:- Chain A: N.28, A.29, T.30
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.28, A:T.30, A:T.30
NAG.4: 1 residues within 4Å:- Chain A: N.231
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.231
NAG.5: 2 residues within 4Å:- Chain A: N.12, G.13
No protein-ligand interaction detected (PLIP)NAG.23: 3 residues within 4Å:- Chain C: N.28, A.29, T.30
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:N.28, C:T.30, C:T.30
NAG.24: 1 residues within 4Å:- Chain C: N.231
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:N.231
NAG.25: 2 residues within 4Å:- Chain C: N.12, G.13
No protein-ligand interaction detected (PLIP)NAG.43: 3 residues within 4Å:- Chain E: N.28, A.29, T.30
3 PLIP interactions:3 interactions with chain E- Hydrogen bonds: E:N.28, E:T.30, E:T.30
NAG.44: 1 residues within 4Å:- Chain E: N.231
1 PLIP interactions:1 interactions with chain E- Hydrogen bonds: E:N.231
NAG.45: 2 residues within 4Å:- Chain E: N.12, G.13
No protein-ligand interaction detected (PLIP)- 45 x SO4: SULFATE ION(Non-functional Binders)(Post Translational Modification)(Non-covalent)
SO4.6: 5 residues within 4Å:- Chain A: Y.117, S.118, G.119, I.120, N.146
Ligand excluded by PLIPSO4.7: 2 residues within 4Å:- Chain A: N.37, P.39
Ligand excluded by PLIPSO4.8: 2 residues within 4Å:- Chain A: R.35, R.303
Ligand excluded by PLIPSO4.9: 2 residues within 4Å:- Chain A: P.39, R.40
Ligand excluded by PLIPSO4.10: 3 residues within 4Å:- Chain A: S.84, D.85, V.86
Ligand excluded by PLIPSO4.11: 3 residues within 4Å:- Chain A: R.163, K.164, S.165
Ligand excluded by PLIPSO4.12: 4 residues within 4Å:- Chain A: K.110, E.111, A.112, R.247
Ligand excluded by PLIPSO4.13: 4 residues within 4Å:- Chain A: F.92, V.93, N.94, E.95
Ligand excluded by PLIPSO4.14: 4 residues within 4Å:- Chain A: T.20, E.21, R.22
- Chain F: G.50
Ligand excluded by PLIPSO4.15: 2 residues within 4Å:- Chain A: S.73, R.252
Ligand excluded by PLIPSO4.16: 4 residues within 4Å:- Chain A: K.301, Q.302, R.303, S.304
Ligand excluded by PLIPSO4.17: 4 residues within 4Å:- Chain B: W.14, E.15, G.16, R.25
Ligand excluded by PLIPSO4.18: 5 residues within 4Å:- Chain B: F.70, N.71, E.72
- Chain E: N.199, N.229
Ligand excluded by PLIPSO4.19: 6 residues within 4Å:- Chain A: Q.302
- Chain B: S.93, Y.94, E.97
- Chain F: E.57, T.59
Ligand excluded by PLIPSO4.20: 5 residues within 4Å:- Chain D: K.123
- Chain F: K.123, E.132
- Ligands: SO4.40, SO4.60
Ligand excluded by PLIPSO4.26: 5 residues within 4Å:- Chain C: Y.117, S.118, G.119, I.120, N.146
Ligand excluded by PLIPSO4.27: 2 residues within 4Å:- Chain C: N.37, P.39
Ligand excluded by PLIPSO4.28: 2 residues within 4Å:- Chain C: R.35, R.303
Ligand excluded by PLIPSO4.29: 2 residues within 4Å:- Chain C: P.39, R.40
Ligand excluded by PLIPSO4.30: 3 residues within 4Å:- Chain C: S.84, D.85, V.86
Ligand excluded by PLIPSO4.31: 3 residues within 4Å:- Chain C: R.163, K.164, S.165
Ligand excluded by PLIPSO4.32: 4 residues within 4Å:- Chain C: K.110, E.111, A.112, R.247
Ligand excluded by PLIPSO4.33: 4 residues within 4Å:- Chain C: F.92, V.93, N.94, E.95
Ligand excluded by PLIPSO4.34: 4 residues within 4Å:- Chain B: G.50
- Chain C: T.20, E.21, R.22
Ligand excluded by PLIPSO4.35: 2 residues within 4Å:- Chain C: S.73, R.252
Ligand excluded by PLIPSO4.36: 4 residues within 4Å:- Chain C: K.301, Q.302, R.303, S.304
Ligand excluded by PLIPSO4.37: 4 residues within 4Å:- Chain D: W.14, E.15, G.16, R.25
Ligand excluded by PLIPSO4.38: 5 residues within 4Å:- Chain A: N.199, N.229
- Chain D: F.70, N.71, E.72
Ligand excluded by PLIPSO4.39: 6 residues within 4Å:- Chain B: E.57, T.59
- Chain C: Q.302
- Chain D: S.93, Y.94, E.97
Ligand excluded by PLIPSO4.40: 5 residues within 4Å:- Chain B: K.123, E.132
- Chain F: K.123
- Ligands: SO4.20, SO4.60
Ligand excluded by PLIPSO4.46: 5 residues within 4Å:- Chain E: Y.117, S.118, G.119, I.120, N.146
Ligand excluded by PLIPSO4.47: 2 residues within 4Å:- Chain E: N.37, P.39
Ligand excluded by PLIPSO4.48: 2 residues within 4Å:- Chain E: R.35, R.303
Ligand excluded by PLIPSO4.49: 2 residues within 4Å:- Chain E: P.39, R.40
Ligand excluded by PLIPSO4.50: 3 residues within 4Å:- Chain E: S.84, D.85, V.86
Ligand excluded by PLIPSO4.51: 3 residues within 4Å:- Chain E: R.163, K.164, S.165
Ligand excluded by PLIPSO4.52: 4 residues within 4Å:- Chain E: K.110, E.111, A.112, R.247
Ligand excluded by PLIPSO4.53: 4 residues within 4Å:- Chain E: F.92, V.93, N.94, E.95
Ligand excluded by PLIPSO4.54: 4 residues within 4Å:- Chain D: G.50
- Chain E: T.20, E.21, R.22
Ligand excluded by PLIPSO4.55: 2 residues within 4Å:- Chain E: S.73, R.252
Ligand excluded by PLIPSO4.56: 4 residues within 4Å:- Chain E: K.301, Q.302, R.303, S.304
Ligand excluded by PLIPSO4.57: 4 residues within 4Å:- Chain F: W.14, E.15, G.16, R.25
Ligand excluded by PLIPSO4.58: 5 residues within 4Å:- Chain C: N.199, N.229
- Chain F: F.70, N.71, E.72
Ligand excluded by PLIPSO4.59: 6 residues within 4Å:- Chain D: E.57, T.59
- Chain E: Q.302
- Chain F: S.93, Y.94, E.97
Ligand excluded by PLIPSO4.60: 5 residues within 4Å:- Chain B: K.123
- Chain D: K.123, E.132
- Ligands: SO4.20, SO4.40
Ligand excluded by PLIP- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Xiong, X. et al., Receptor Binding by an H7N9 Influenza Virus from Humans. Nature (2013)
- Release Date
- 2013-07-03
- Peptides
- HAEMAGGLUTININ HA1: ACE
HAEMAGGLUTININ HA2: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AB
BD
BF
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.55 Å
- Oligo State
- hetero-3-3-mer
- Ligands
- 3 x NAG- GAL- SIA: N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-functional Binders)
- 3 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-functional Binders)(Non-covalent)
- 9 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)(Non-functional Binders)
- 45 x SO4: SULFATE ION(Non-functional Binders)(Post Translational Modification)(Non-covalent)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Xiong, X. et al., Receptor Binding by an H7N9 Influenza Virus from Humans. Nature (2013)
- Release Date
- 2013-07-03
- Peptides
- HAEMAGGLUTININ HA1: ACE
HAEMAGGLUTININ HA2: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AB
BD
BF
B