- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- hetero-3-3-mer
- Ligands
- 3 x NAG- GLA- SIA- FUC: N-acetyl-alpha-neuraminic acid-(2-3)-alpha-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 9 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-functional Binders)
NAG.4: 1 residues within 4Å:- Chain A: N.23
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.23
- Water bridges: A:N.23
NAG.5: 2 residues within 4Å:- Chain A: N.165, N.236
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.165
NAG.6: 3 residues within 4Å:- Chain B: E.147, E.150, N.154
No protein-ligand interaction detected (PLIP)NAG.8: 2 residues within 4Å:- Chain C: K.22, N.23
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:N.23
- Water bridges: C:K.22, C:N.23
NAG.9: 2 residues within 4Å:- Chain C: N.165, N.236
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:N.165
NAG.10: 4 residues within 4Å:- Chain D: E.147, E.150, N.154, T.156
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:T.156, D:T.156
NAG.12: 2 residues within 4Å:- Chain E: K.22, N.23
2 PLIP interactions:2 interactions with chain E- Hydrogen bonds: E:N.23
- Water bridges: E:N.23
NAG.13: 2 residues within 4Å:- Chain E: N.165, N.236
2 PLIP interactions:2 interactions with chain E- Hydrogen bonds: E:N.165, E:N.236
NAG.14: 5 residues within 4Å:- Chain F: E.147, E.150, S.151, N.154, T.156
1 PLIP interactions:1 interactions with chain F- Hydrogen bonds: F:E.147
- 3 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Post Translational Modification)(Non-functional Binders)
EPE.7: 6 residues within 4Å:- Chain A: C.4
- Chain B: W.14, H.25, Y.34, N.135, C.137
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:W.14, B:W.14, B:N.135
- Salt bridges: B:H.25
EPE.11: 6 residues within 4Å:- Chain C: C.4
- Chain D: W.14, H.25, Y.34, N.135, C.137
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:W.14, D:W.14, D:N.135
- Salt bridges: D:H.25
EPE.15: 5 residues within 4Å:- Chain F: W.14, H.25, Y.34, N.135, C.137
3 PLIP interactions:3 interactions with chain F- Hydrogen bonds: F:W.14, F:N.135
- Salt bridges: F:H.25
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Xiong, X. et al., Recognition of Sulphated and Fucosylated Receptor Sialosides by A/Vietnam/1194/2004 (H5N1) Influenza Virus. Virus Res. (2013)
- Release Date
- 2013-09-25
- Peptides
- HAEMAGGLUTININ: ACE
HAEMAGGLUTININ: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CE
EB
BD
DF
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- hetero-3-3-mer
- Ligands
- 3 x NAG- GLA- SIA- FUC: N-acetyl-alpha-neuraminic acid-(2-3)-alpha-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 9 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-functional Binders)
- 3 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Post Translational Modification)(Non-functional Binders)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Xiong, X. et al., Recognition of Sulphated and Fucosylated Receptor Sialosides by A/Vietnam/1194/2004 (H5N1) Influenza Virus. Virus Res. (2013)
- Release Date
- 2013-09-25
- Peptides
- HAEMAGGLUTININ: ACE
HAEMAGGLUTININ: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CE
EB
BD
DF
F