SMTL ID : 3vy7.1

Crystal structure of human pancreatic secretory protein ZG16p with O-(alpha-D-mannosyl)-L-serine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.14 Å

Oligo State

monomer

Ligands

1 x SER: SERINE(Non-covalent)

SER.1: 2 residues within 4Å: Chain A: S.130 Ligands: MAN.2 2 PLIP interactions: 2 interactions with chain A Water bridges: A:Y.86, A:S.130

1 x MAN: alpha-D-mannopyranose(Non-covalent)

MAN.2: 8 residues within 4Å: Chain A: G.16, G.17, Y.86, G.129, S.130, L.131, D.133 Ligands: SER.1 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.17, A:G.129, A:S.130, A:L.131, A:L.131 Water bridges: A:D.133

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: K.52, V.53, W.54 Ligand excluded by PLIP CL.4: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Kanagawa, M. et al., Structural Basis for Multiple Sugar Recognition of Jacalin-related Human ZG16p Lectin. J.Biol.Chem. (2014)

Release Date

2013-09-25

Peptides

Zymogen granule membrane protein 16: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Zymogen granule membrane protein 16

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