SMTL ID : 3vko.1 (1 other biounit)

Galectin-8 N-terminal domain in complex with sialyllactosamine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.08 Å

Oligo State

monomer

Ligands

1 x NAG- GAL- SIA: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG-GAL-SIA.1: 9 residues within 4Å: Chain A: R.45, Q.47, R.59, H.65, N.67, R.69, N.79, W.86, E.89 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.45, A:R.45, A:R.69, A:N.79, A:E.89, A:R.69, A:R.69, A:Q.47, A:W.86 Water bridges: A:E.89, A:E.89 Salt bridges: A:R.59, A:H.65

1 x CL: CHLORIDE ION(Non-covalent)

CL.2: 3 residues within 4Å: Chain A: L.110, K.111, D.112 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Yoshida, H. et al., X-ray structure of a protease-resistant mutant form of human galectin-8 with two carbohydrate recognition domains. Febs J. (2012)

Release Date

2012-09-12

Peptides

Galectin-8: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Galectin-8

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