SMTL ID : 3r6j.1

Crystal Structure of the Capsid P Domain from Norwalk Virus Strain Hiroshima/1999

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-dimer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 7 residues within 4Å: Chain A: P.10, L.12, E.231, H.235 Chain B: Q.234, Q.238 Ligands: EDO.2 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.235 EDO.2: 7 residues within 4Å: Chain A: Q.234, Q.238 Chain B: P.10, L.12, E.231, H.235 Ligands: EDO.1 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:H.235

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Hansman, G.S. et al., Crystal structures of GII.10 and GII.12 norovirus protruding domains in complex with histo-blood group antigens reveal details for a potential site of vulnerability. J.Virol. (2011)

Release Date

2011-05-11

Peptides

VP1 protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

VP1 protein

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