SMTL ID : 3qc6.1

GspB

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: D.155, E.157, D.183, N.184, D.246 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.155, A:D.155, A:E.157, A:D.183, A:D.183

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: N.285, T.286, F.288 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.286, A:T.286 GOL.5: 5 residues within 4Å: Chain A: W.197, Y.199, Y.238, T.239, R.240 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.198, A:R.240, A:R.240

2 x HDZ: NITROGEN MOLECULE(Non-covalent)

HDZ.3: 3 residues within 4Å: Chain A: R.315, A.316, Q.317 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.316, A:Q.317 HDZ.4: 2 residues within 4Å: Chain A: N.184, S.185 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.185, A:S.185

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Pyburn, T.M. et al., A Structural Model for Binding of the Serine-Rich Repeat Adhesin GspB to Host Carbohydrate Receptors. Plos Pathog. (2011)

Release Date

2011-08-10

Peptides

Platelet binding protein GspB: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

Platelet binding protein GspB

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