SMTL ID : 3ap6.1 (3 other biounits)

Crystal structure of the galectin-8 N-terminal carbohydrate recognition domain in complex with lactose 3'-sulfate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.58 Å

Oligo State

monomer

Ligands

1 x BGC- GAL: beta-D-galactopyranose-(1-4)-beta-D-glucopyranose(Non-covalent)

BGC-GAL.1: 8 residues within 4Å: Chain A: R.45, H.65, N.67, R.69, N.79, W.86, E.89 Ligands: SO4.2 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.69, A:R.69, A:R.45, A:R.45, A:R.69, A:N.79, A:E.89 Water bridges: A:E.89, A:E.89, A:R.45

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain A: R.45, Q.47, R.59, H.65, W.86 Ligands: BGC-GAL.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.45, A:Q.47, A:R.59, A:R.59

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Ideo, H. et al., Galectin-8-N-domain recognition mechanism for sialylated and sulfated glycans. J.Biol.Chem. (2011)

Release Date

2011-01-26

Peptides

Galectin-8: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Galectin-8

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