SMTL ID : 3ah1.1 (2 other biounits)

HA1 subcomponent of botulinum type C progenitor toxin complexed with N-acetylneuramic acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

2 x SLB: N-acetyl-beta-neuraminic acid(Non-covalent)

SLB.1: 7 residues within 4Å: Chain A: S.167, K.168, N.169, L.170, W.178, F.181, R.185 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:W.178, A:F.181 Hydrogen bonds: A:L.170, A:R.185 SLB.2: 6 residues within 4Å: Chain A: R.12, N.14, E.15, N.234, Y.248, T.253 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.248 Hydrogen bonds: A:R.12, A:N.14, A:E.15, A:T.253, A:T.253 Water bridges: A:N.13, A:N.13, A:N.234, A:N.234

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Nakamura, T. et al., Sugar-binding sites of the HA1 subcomponent of Clostridium botulinum type C progenitor toxin. J.Mol.Biol. (2008)

Release Date

2010-04-28

Peptides

Main hemagglutinin component: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Main hemagglutinin component

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