SMTL ID : 2xjq.1

X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF THE FLOCCULIN FLO5 FROM SACCHAROMYCES CEREVISIAE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 2 residues within 4Å: Chain A: D.69, N.71 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.69, A:N.71 NA.3: 4 residues within 4Å: Chain A: D.148, N.211, V.213, W.215 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.148, A:N.211, A:V.213

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 6 residues within 4Å: Chain A: Y.89, C.94, K.95, G.96, M.97, G.98 Ligand excluded by PLIP

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 8 residues within 4Å: Chain A: K.23, N.27, G.61, Q.165, E.166, S.240, F.241, D.242 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:N.27, A:N.27, A:F.241, A:D.242 Water bridges: A:V.60, A:Q.165, A:E.166, A:S.240 GOL.5: 5 residues within 4Å: Chain A: V.75, S.76, S.77, A.99, S.101 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.99, A:S.101 GOL.6: 4 residues within 4Å: Chain A: N.91, W.92, C.100, N.102 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:W.92, A:C.100 Water bridges: A:N.91 GOL.7: 4 residues within 4Å: Chain A: L.57, T.118, T.119, N.122 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.119, A:T.119, A:N.122 Water bridges: A:Y.33

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Veelders, M. et al., Structural Basis of Flocculin-Mediated Social Behavior in Yeast. Proc.Natl.Acad.Sci.USA (2010)

Release Date

2010-12-15

Peptides

FLOCCULATION PROTEIN FLO5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

FLOCCULATION PROTEIN FLO5

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