SMTL ID : 2vxj.1 (23 other biounits)

CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH AGAL13BGAL14GLC AT 1.9 A RESOLUTION

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x BGC- GAL- GLA: alpha-D-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose(Non-covalent)

BGC-GAL-GLA.1: 10 residues within 4Å: Chain A: Y.36, H.50, P.51, Q.53, C.62, D.100, V.101, T.104, N.107 Ligands: CA.2 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.53, A:Q.53, A:D.100, A:N.107 Water bridges: A:H.50, A:P.51, A:Q.53, A:N.107

1 x CA: CALCIUM ION

CA.2: 6 residues within 4Å: Chain A: Y.36, D.100, T.104, N.107, N.108 Ligands: BGC-GAL-GLA.1 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:Y.36, A:D.100, A:T.104

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 4 residues within 4Å: Chain A: G.43, P.44, Q.45, T.79 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.43, A:Q.45, A:Q.45

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Blanchard, B. et al., Structural Basis of the Preferential Binding for Globo-Series Glycosphingolipids Displayed by Pseudomonas Aeruginosa Lectin I. J.Mol.Biol. (2008)

Release Date

2008-09-16

Peptides

PA-I GALACTOPHILIC LECTIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PA-I GALACTOPHILIC LECTIN

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