SMTL ID : 2jxa.1

Mouse Latrophilin-1 GPCR Gal_lectin domain in complex with Rhamnose

Coordinates

PDB Format

Method

SOLUTION NMR

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: Q.66, N.69, N.70 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:N.69 Hydrogen bonds: A:N.70

1 x RAM: alpha-L-rhamnopyranose(Non-covalent)

RAM.2: 10 residues within 4Å: Chain A: E.14, Y.35, Q.49, D.85, C.87, P.88, G.89, T.90, Y.91, K.92 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.14, A:E.14, A:D.85, A:G.89, A:K.92, A:K.92

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Vakonakis, I. et al., Solution structure and sugar-binding mechanism of mouse Latrophilin-1 RBL: a novel 7TM receptor-attached lectin-like domain. To be Published

Release Date

2008-04-29

Peptides

Latrophilin 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Latrophilin 1

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