SMTL ID : 1nws.1 (3 other biounits)

Crystal structure of human cartilage gp39 (HC-gp39) in complex with chitobiose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 7 residues within 4Å: Chain A: N.39, I.40, S.41, T.47, W.48, R.84 Ligands: NDG-NAG.2 No protein-ligand interaction detected (PLIP)

1 x NDG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose(Non-covalent)

NDG-NAG.2: 5 residues within 4Å: Chain A: Y.13, W.48, E.49, W.50 Ligands: NAG-NAG.1 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.13 Water bridges: A:W.50 Hydrogen bonds: A:E.49, A:E.49, A:E.49

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Fusetti, F. et al., Crystal structure and carbohydrate-binding properties of the human cartilage glycoprotein-39. J.Biol.Chem. (2003)

Release Date

2003-08-26

Peptides

Chitinase-3 like protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Chitinase-3 like protein 1

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