SMTL ID : 1les.1

LENTIL LECTIN COMPLEXED WITH SUCROSE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-2-2-mer

Ligands

2 x GLC- FRU: beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose(Non-covalent)

GLC-FRU.1: 9 residues within 4Å: Chain A: A.80, D.81, G.98, G.99, F.123, N.125 Chain C: G.29, A.30, E.31 6 PLIP interactions: 3 interactions with chain C, 3 interactions with chain A Hydrogen bonds: C:E.31, C:E.31, A:G.99, A:N.125, C:A.30, C:E.31, C:E.31 Water bridges: A:G.97 GLC-FRU.2: 9 residues within 4Å: Chain B: A.80, D.81, G.98, G.99, F.123, N.125 Chain D: G.29, A.30, E.31 7 PLIP interactions: 4 interactions with chain D, 3 interactions with chain B Hydrogen bonds: D:E.31, D:E.31, B:G.99, B:N.125, D:G.29, D:A.30, D:E.31, D:E.31 Water bridges: B:G.97

2 x CA: CALCIUM ION(Non-covalent)

CA.3: 4 residues within 4Å: Chain A: D.121, F.123, N.125, D.129 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.121, A:F.123, A:D.129, H2O.1, H2O.1 CA.5: 4 residues within 4Å: Chain B: D.121, F.123, N.125, D.129 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.121, B:F.123, B:D.129, H2O.5, H2O.5

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.4: 4 residues within 4Å: Chain A: E.119, D.121, D.129, H.136 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.119, A:D.121, A:D.129, A:H.136, H2O.1, H2O.1 MN.6: 4 residues within 4Å: Chain B: E.119, D.121, D.129, H.136 6 PLIP interactions: 4 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.119, B:D.121, B:D.129, B:H.136, H2O.5, H2O.5

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Casset, F. et al., NMR, molecular modeling, and crystallographic studies of lentil lectin-sucrose interaction. J.Biol.Chem. (1995)

Release Date

1995-12-07

Peptides

LENTIL LECTIN: AB
LENTIL LECTIN: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

C
B

D
D

LENTIL LECTIN

LENTIL LECTIN

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