SMTL ID : 1jac.1 (2 other biounits)

A NOVEL MODE OF CARBOHYDRATE RECOGNITION IN JACALIN, A MORACEAE PLANT LECTIN WITH A BETA-PRISM

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.43 Å

Oligo State

hetero-4-4-mer

Ligands

4 x AMG: methyl alpha-D-galactopyranoside(Non-covalent)

AMG.1: 7 residues within 4Å: Chain A: G.1, Y.78, V.80, G.121, Y.122, W.123, D.125 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.1, A:G.1, A:G.121, A:Y.122, A:W.123, A:W.123 AMG.2: 8 residues within 4Å: Chain C: G.1, F.47, Y.78, V.80, G.121, Y.122, W.123, D.125 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:G.1, C:G.1, C:G.121, C:Y.122, C:W.123, C:W.123 AMG.3: 7 residues within 4Å: Chain E: G.1, Y.78, V.80, G.121, Y.122, W.123, D.125 6 PLIP interactions: 6 interactions with chain E Hydrogen bonds: E:G.1, E:G.1, E:G.121, E:Y.122, E:W.123, E:W.123 AMG.4: 8 residues within 4Å: Chain G: G.1, F.47, Y.78, V.80, G.121, Y.122, W.123, D.125 6 PLIP interactions: 6 interactions with chain G Hydrogen bonds: G:G.1, G:G.1, G:G.121, G:Y.122, G:W.123, G:W.123

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Sankaranarayanan, R. et al., A novel mode of carbohydrate recognition in jacalin, a Moraceae plant lectin with a beta-prism fold. Nat.Struct.Biol. (1996)

Release Date

1997-06-05

Peptides

JACALIN: ACEG
JACALIN: BDFH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

E
A

G
C

B
B

D
D

F
B

H
D

JACALIN

JACALIN

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