SMTL ID : 1isy.1

Crystal structure of xylanase from Streptomyces olivaceoviridis E-86 complexed with glucose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

4 x BGC: beta-D-glucopyranose(Non-covalent)

BGC.1: 8 residues within 4Å: Chain A: D.325, V.326, P.327, N.328, Q.338, Y.340, H.343, N.347 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.325, A:D.325, A:N.328, A:Q.338, A:N.347 Salt bridges: A:H.343 BGC.2: 8 residues within 4Å: Chain A: D.408, A.409, V.410, G.411, G.412, Q.421, Y.423, N.430 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:D.408, A:D.408, A:G.411, A:G.412, A:Q.421, A:N.430, A:Q.431 Water bridges: A:D.408, A:Y.423, A:S.426 BGC.3: 8 residues within 4Å: Chain B: D.325, V.326, P.327, N.328, Q.338, Y.340, H.343, N.347 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:D.325, B:N.328, B:N.328, B:A.329, B:Q.338, B:N.347, B:N.347 Salt bridges: B:H.343 BGC.4: 8 residues within 4Å: Chain B: D.408, A.409, V.410, G.411, G.412, Q.421, Y.423, N.430 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:D.408, B:G.411, B:G.412, B:Q.421, B:N.430, B:N.430, B:Q.431

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fujimoto, Z. et al., Crystal structures of the sugar complexes of Streptomyces olivaceoviridis E-86 xylanase: sugar binding structure of the family 13 carbohydrate binding module. J.Mol.Biol. (2002)

Release Date

2002-02-20

Peptides

endo-1,4-beta-D-xylanase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

endo-1,4-beta-D-xylanase

Related Entries With Identical Sequence