Q8WWA0 identified as Ficolin-like in LectomeXplore

Q8WWA0

NCBI protein

NP_060095

UniProt

Q8WWA0

Length

Genus

Subspecies

Strain: assembly

Definition

Lectin class

Score

Chz/contig

NC_000001.11

Species

UniRef representative

Pfam

Cazy

Redundant proteins identified: Q5IWS5 AAL58073.1 AAO17800.1

Amino acid conservation

Best predicted lectin domain

Verified reference

Reference carbohydrate binding sites

Reference conserved motif. Graphics generated by Skylign

Gene viewer

REFERENCE: ESPRSCKDLLDEG-SALSGLYTLL-PDGRALQVFCDMDTDGGGWTVVQR--------------R---QDGSVDFYRE----WANYKQFGSAEGEF-------------------WLGNDKIHALTAQGSSELR----VDLVDFEGNNQFAKYKSFKVKDEEEKYKLDLGAFV------GSAGDSLSLHSNK----------QFSTKDKDRDASESNCAVKVKGAWWYKNCHESNGLYLEGSHESYAD--GIDWS---SAKGYSYSKKVSEMKVRPV
PREDICTED: SLPRSCKEIKDECPSAFDGLYFLRTENGVIYQTFCDMTSGGGGWTLVASVHENDMRGKCTVGDRWSSQQGSKAVYPEGDGNWANYNTFGSAEAATSDDYKNPGYYDIQAKDLGIWHVPNKSPMQHWRNSSLLRYRTDTGFLQTLGHNLFGIYQKYPVKYGEGKCWTDNGPVIPVVYDFGDAQKTASYYSPYGQREFTAGFVQFRVFNNERAANALCAGMRVTGCNTEHHCIGGGGYFPEASPQQCGDFSGFDWSGYGTHVGYSSSREITEAAVLLF

View sequence for Ficolin-like 36 : 311View gene sequence View neighboring sequences

How to cite: François Bonnardel, Julien Mariethoz, Serge Pérez, Anne Imberty, Frédérique Lisacek, LectomeXplore, an update of UniLectin for the discovery of carbohydrate-binding proteins based on a new lectin classification, Nucleic Acids Research doi.org/10.1093/nar/gkaa1019