P27824 identified as P-domain of calnexin and reticulin in LectomeXplore

P27824

NCBI protein

NP_001019820

UniProt

P27824

Length

Genus

Subspecies

Strain: assembly

Definition

Lectin class

Score

Chz/contig

NC_000005.10

Species

UniRef representative

Pfam

Cazy

Redundant proteins identified: A0A7P0T840 AAA21749.1

Amino acid conservation

Best predicted lectin domain

Verified reference

Reference carbohydrate binding sites

Reference conserved motif. Graphics generated by Skylign

Gene viewer

REFERENCE: KVYFKEEFEDGD--KWIESKAKKD-L-GKVELSSGKFYGDAE-------DKGLQLSEDAKFYALSAKL-EPFSNKKKTLVVQFEVKKEQDIDCGGGYVKLLPK---LDEEKLHGESEYNIMFGPDKCGGDKKVHVILNYKGKNKLISKEIRAK----------EDELTHLYTLIVRPDNSYEVKIDNSQVESGSLEED---------------------WDLLA-----------------------------------------------PK----------------------GSG------------------------------------IDNPDYVEDAELYKVDSFAVIGLDLWQVKSGTIFDDILITDDEKEVEDLANETYGVKKAAEKKAK
PREDICTED: EVYFADSFDRGTLSGWILSKAKKDDTDDEIAKYDGKWEVEEMKESKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLNDMTPPVNPSREIEDPEDRKPEDWDERPKIPDPEAVKPDDWDEDAPAKIPDEEATKPEGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPRCESAPGCGVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICADRRIVDDWANDGWGLKKAADGAAE

View sequence for P-domain of calnexin and reticulin 68 : 466View gene sequence View neighboring sequences

How to cite: François Bonnardel, Julien Mariethoz, Serge Pérez, Anne Imberty, Frédérique Lisacek, LectomeXplore, an update of UniLectin for the discovery of carbohydrate-binding proteins based on a new lectin classification, Nucleic Acids Research doi.org/10.1093/nar/gkaa1019